RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 IFI27P40305 119 aaPredicted RBP7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 STPG4Q8N801 248 aa7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 MAP1LC3AQ9H492 121 aa7.06□□□□□ -1.28
CHRNA3-205ENST00000559080 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
CHRNA3-205ENST00000559080 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
CHRNA3-205ENST00000559080 LINC01600Q96MT4 127 aa7.05□□□□□ -1.28
CHRNA3-205ENST00000559080 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
CHRNA3-205ENST00000559080 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
CHRNA3-205ENST00000559080 UQCC3Q6UW78 93 aa7.04□□□□□ -1.28
CHRNA3-205ENST00000559080 C2orf48Q96LS8 159 aa7.04□□□□□ -1.28
CHRNA3-205ENST00000559080 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 OR10D4PQ8NGN7 298 aa7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 CTDSP1Q9GZU7 261 aa7.03□□□□□ -1.28
CHRNA3-205ENST00000559080 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
CHRNA3-205ENST00000559080 GAGE2BQ13066 116 aa7.02□□□□□ -1.29
CHRNA3-205ENST00000559080 IMMP2LQ96T52 175 aa7.02□□□□□ -1.29
CHRNA3-205ENST00000559080 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
CHRNA3-205ENST00000559080 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
CHRNA3-205ENST00000559080 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 IGHV3OR16-9A0A0B4J2B5 98 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 TMEM218A2RU14 115 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 ADCYAP1P18509 176 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 RPL18AQ02543 176 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 Q6ZN92 141 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 TEX43Q6ZNM6 134 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 Q8N8P6 123 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 FAM104AQ969W3 186 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
CHRNA3-205ENST00000559080 KRTAP10-8P60410 259 aa7□□□□□ -1.29
CHRNA3-205ENST00000559080 C2orf66Q6UXQ4 117 aa7□□□□□ -1.29
CHRNA3-205ENST00000559080 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
CHRNA3-205ENST00000559080 TRAV9-1A0A075B6T8 112 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 A0A0J9YXV3 536 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 F8WDY8 70 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 K7EMI3 77 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 NDUFA1O15239 70 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 S100PP25815 95 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 IFITM2Q01629 132 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
CHRNA3-205ENST00000559080 A0A087WZ39 114 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 G0S2P27469 103 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 COMMD7Q86VX2 200 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 SEC11CQ9BY50 192 aa6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 MRPL35Q9NZE8 188 aaKnown RBP6.98□□□□□ -1.29
CHRNA3-205ENST00000559080 NPSP0C0P6 89 aa6.97□□□□□ -1.29
CHRNA3-205ENST00000559080 UBE2D1P51668 147 aa6.97□□□□□ -1.29
CHRNA3-205ENST00000559080 VCX2Q9H322 139 aa6.97□□□□□ -1.29
CHRNA3-205ENST00000559080 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
CHRNA3-205ENST00000559080 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.3
CHRNA3-205ENST00000559080 Q6ZRP5 223 aa6.96□□□□□ -1.3
CHRNA3-205ENST00000559080 LPAP08519 4548 aa6.96□□□□□ -1.3
CHRNA3-205ENST00000559080 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
CHRNA3-205ENST00000559080 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
CHRNA3-205ENST00000559080 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
CHRNA3-205ENST00000559080 AMELXQ99217 191 aa6.95□□□□□ -1.3
CHRNA3-205ENST00000559080 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 PRSS2P07478 247 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 SEC11AP67812 179 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 COX19Q49B96 90 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 ZC2HC1BQ5TFG8 222 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 TIMM17AQ99595 171 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
CHRNA3-205ENST00000559080 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 MT-ND6P03923 174 aa6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 RHEBQ15382 184 aa6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
CHRNA3-205ENST00000559080 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 HERVK_113P63121 156 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 TOMM7Q9P0U1 55 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
CHRNA3-205ENST00000559080 CKS1BP61024 79 aa6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 SRSF9Q13242 221 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 FA2HQ7L5A8 372 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms