RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SS18Q15532 418 aa4.62□□□□□ -1.67
SPG11-213ENST00000558988 ADIRFQ15847 76 aa4.62□□□□□ -1.67
SPG11-213ENST00000558988 RNF185Q96GF1 192 aa4.62□□□□□ -1.67
SPG11-213ENST00000558988 TRAV13-1A0A0B4J241 112 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 IGHV1-58A0A0C4DH39 117 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 TRBV6-5A0A0K0K1A5 114 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 SRP19P09132 144 aaKnown RBP4.61□□□□□ -1.67
SPG11-213ENST00000558988 RAB4AP20338 218 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 RIGQ13278 110 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 CARD19Q96LW7 228 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 FAM210AQ96ND0 272 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 TMEM191AQ9H0A3 160 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 OSTCQ9NRP0 149 aa4.61□□□□□ -1.67
SPG11-213ENST00000558988 FAT1Q14517 4588 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 A0A1B0GVG6 124 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 ESDP10768 282 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 SNRPEP62304 92 aaKnown RBP4.6□□□□□ -1.67
SPG11-213ENST00000558988 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 TMEM241Q24JQ0 296 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 ZNF664Q8N3J9 261 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 PLAC8Q9NZF1 115 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 V9GYV3 84 aa4.6□□□□□ -1.67
SPG11-213ENST00000558988 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
SPG11-213ENST00000558988 RPL23P62829 140 aaKnown RBP4.59□□□□□ -1.67
SPG11-213ENST00000558988 PRR3P79522 188 aaKnown RBP4.59□□□□□ -1.67
SPG11-213ENST00000558988 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
SPG11-213ENST00000558988 Q6ZRU5 148 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 Q6ZUT4 128 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 C5orf38Q86SI9 138 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 ISOC2Q96AB3 205 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 KIR2DL4Q99706 377 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 CDC42SE2Q9NRR3 84 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 NAT8BQ9UHF3 227 aa4.59□□□□□ -1.67
SPG11-213ENST00000558988 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 TRBV27A0A0K0K1C4 114 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 C9JQL5 133 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 COX7A2LO14548 114 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 CKS2P33552 79 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 RPL18AQ02543 176 aaKnown RBP4.58□□□□□ -1.68
SPG11-213ENST00000558988 MRPL51Q4U2R6 128 aaKnown RBP4.58□□□□□ -1.68
SPG11-213ENST00000558988 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 MRPL52Q86TS9 123 aaKnown RBP4.58□□□□□ -1.68
SPG11-213ENST00000558988 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 CAMK2N2Q96S95 79 aa4.58□□□□□ -1.68
SPG11-213ENST00000558988 MYCBP2O75592 4640 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 C1orf196B1AJZ1 125 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 PPP1R17O96001 155 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 RPL39P62891 51 aaKnown RBP4.57□□□□□ -1.68
SPG11-213ENST00000558988 PEA15Q15121 130 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 NAT8Q9UHE5 227 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 UBE2D4Q9Y2X8 147 aa4.57□□□□□ -1.68
SPG11-213ENST00000558988 HERC1Q15751 4861 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 LOC107984640A0A0U1RRK4 108 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 D6R8Y8 96 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 PPP1R2P9O14990 202 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 TCAPO15273 167 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 SPAG11BQ08648 103 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 UBE2V1Q13404 147 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 FAM104BQ5XKR9 115 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 OPRPNQ99935 248 aaPredicted RBP4.56□□□□□ -1.68
SPG11-213ENST00000558988 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
SPG11-213ENST00000558988 SMIM27A0A1W2PRY6 76 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 APOMO95445 188 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 NPYP01303 97 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 HBBP68871 147 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 LBHQ53QV2 105 aaPredicted RBP4.55□□□□□ -1.68
SPG11-213ENST00000558988 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
SPG11-213ENST00000558988 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 F8W036 122 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 S100A8P05109 93 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 GAGE2AQ6NT46 116 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 Q6ZRP5 223 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 C20orf78Q9BR46 151 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
SPG11-213ENST00000558988 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 A0A1B0GW15 77 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 LINC00862A6NCI5 91 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
SPG11-213ENST00000558988 MT-ND6P03923 174 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 RAB5AP20339 215 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 C9orf116Q5BN46 136 aaPredicted RBP4.53□□□□□ -1.68
SPG11-213ENST00000558988 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 PHF5AQ7RTV0 110 aaKnown RBP4.53□□□□□ -1.68
SPG11-213ENST00000558988 TIMM21Q9BVV7 248 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 SPANXA1Q9NS26 97 aa4.53□□□□□ -1.68
SPG11-213ENST00000558988 CSDC2Q9Y534 153 aaKnown RBP4.53□□□□□ -1.68
SPG11-213ENST00000558988 TGIF2-C20orf24A0A0A6YYL0 155 aa4.52□□□□□ -1.69
SPG11-213ENST00000558988 C1orf137Q5JT78 98 aa4.52□□□□□ -1.69
SPG11-213ENST00000558988 SPINK6Q6UWN8 80 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms