RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SMIM2Q9BVW6 85 aa3.88□□□□□ -1.79
CTDSPL2-204ENST00000558966 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
CTDSPL2-204ENST00000558966 HERC1Q15751 4861 aa3.88□□□□□ -1.79
CTDSPL2-204ENST00000558966 LINC00959A0A1B0GUT2 108 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 F8W036 122 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 MT-ND4LP03901 98 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 CNBPP62633 177 aaKnown RBP3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 Q75L30 129 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 TMEM101Q96IK0 257 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 CHAC1Q9BUX1 264 aa3.87□□□□□ -1.79
CTDSPL2-204ENST00000558966 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 TMEM218A2RU14 115 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 PANO1I0J062 215 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 PHOX2AO14813 284 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 CCL25O15444 150 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 PRSS2P07478 247 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 XCL1P47992 114 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 UQCC3Q6UW78 93 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 ZNF664Q8N3J9 261 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 CIRBP-AS1Q8TBR5 109 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 CSDC2Q9Y534 153 aaKnown RBP3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 PPBPP02775 128 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 HIGD2BQ4VC39 106 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 SDIM1Q6ZPB5 146 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 Q6ZUT4 128 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 ORMDL3Q8N138 153 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 PRELID3AQ96N28 172 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 TIMM21Q9BVV7 248 aa3.86□□□□□ -1.79
CTDSPL2-204ENST00000558966 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 TCAPO15273 167 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 GAGE2BQ13066 116 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 GAGE2EQ4V326 116 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 PET117Q6UWS5 81 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 TMEM136Q6ZRR5 245 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 FAM104AQ969W3 186 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 GAGE2DQ9UEU5 116 aa3.85□□□□□ -1.79
CTDSPL2-204ENST00000558966 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 CIRBPQ14011 172 aaKnown RBP3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 SS18Q15532 418 aa3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 COMMD7Q86VX2 200 aa3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
CTDSPL2-204ENST00000558966 IGHV3-64A0A075B6Q5 118 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 CHTF8P0CG12 524 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 SMAGPQ0VAQ4 97 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 IMMP2LQ96T52 175 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 SEC11CQ9BY50 192 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 SPANXA1Q9NS26 97 aa3.84□□□□□ -1.8
CTDSPL2-204ENST00000558966 TRAV13-1A0A0B4J241 112 aa3.83□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGHV1-58A0A0C4DH39 117 aa3.83□□□□□ -1.8
CTDSPL2-204ENST00000558966 C1orf196B1AJZ1 125 aa3.83□□□□□ -1.8
CTDSPL2-204ENST00000558966 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
CTDSPL2-204ENST00000558966 LAMTOR2Q9Y2Q5 125 aa3.83□□□□□ -1.8
CTDSPL2-204ENST00000558966 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
CTDSPL2-204ENST00000558966 MRPS36P82909 103 aaKnown RBP3.82□□□□□ -1.8
CTDSPL2-204ENST00000558966 SPACA4Q8TDM5 124 aa3.82□□□□□ -1.8
CTDSPL2-204ENST00000558966 MAP1LC3AQ9H492 121 aa3.82□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGLV4-3A0A075B6K6 122 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 TRAV9-1A0A075B6T8 112 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 COX7A2LO14548 114 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 RAB5AP20339 215 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 COX6A2Q02221 97 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 C5orf38Q86SI9 138 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 Q8N8P6 123 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 CARHSP1Q9Y2V2 147 aaKnown RBP3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 A0A087WYN8 130 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGHV3OR16-9A0A0B4J2B5 98 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 CARD19Q96LW7 228 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGLV4-69A0A075B6H9 119 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 A0A096LNI7 61 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 IFI27P40305 119 aaPredicted RBP3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 SYCNQ0VAF6 134 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 RHEBQ15382 184 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 IGKV2-30P06310 120 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 S100PP25815 95 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 HNRNPA3P51991 378 aaKnown RBP3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 RPL37AP61513 92 aaKnown RBP3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 ZC2HC1BQ5TFG8 222 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 Q6ZRU5 148 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 TMEM141Q96I45 108 aa3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 NXT2Q9NPJ8 142 aaKnown RBP3.79□□□□□ -1.8
CTDSPL2-204ENST00000558966 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms