RNA–Protein interactions for RNA: ENST00000558916.1

GATM-209, Transcript of glycine amidinotransferase, human

TSL 2

Gene GATM, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GATM-209	ENST00000558916	CSDC2	Q9Y534	153 aa	Known RBP	4.57	□□□□□ -1.68
GATM-209	ENST00000558916	TMEM250	H0YL14	139 aa		4.56	□□□□□ -1.68
GATM-209	ENST00000558916	TAGLN2	P37802	199 aa	Known RBP	4.56	□□□□□ -1.68
GATM-209	ENST00000558916	SUMO2	P61956	95 aa	Known RBP	4.56	□□□□□ -1.68
GATM-209	ENST00000558916	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.56	□□□□□ -1.68
GATM-209	ENST00000558916	LINC01551	Q86U37	167 aa		4.56	□□□□□ -1.68
GATM-209	ENST00000558916	TSKU	Q8WUA8	353 aa		4.56	□□□□□ -1.68
GATM-209	ENST00000558916	ORAOV1	Q8WV07	137 aa		4.56	□□□□□ -1.68
GATM-209	ENST00000558916	C6orf48	Q9UBA6	75 aa		4.56	□□□□□ -1.68
GATM-209	ENST00000558916		A0A087WZ39	114 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	VCY	O14598	125 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	FCER1G	P30273	86 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	RNF151	Q2KHN1	245 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	MRPL51	Q4U2R6	128 aa	Known RBP	4.55	□□□□□ -1.68
GATM-209	ENST00000558916	ALKAL2	Q6UX46	152 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	TCTE3	Q8IZS6	198 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	DIRC1	Q969H9	104 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	BORCS7	Q96B45	105 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	MRPL35	Q9NZE8	188 aa	Known RBP	4.55	□□□□□ -1.68
GATM-209	ENST00000558916		V9GYV3	84 aa		4.55	□□□□□ -1.68
GATM-209	ENST00000558916	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	TLX1NB	P0CAT3	122 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	OR10D4P	Q8NGN7	298 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	FAM210A	Q96ND0	272 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	SMIM7	Q9BQ49	75 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	TIMM21	Q9BVV7	248 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	OSTC	Q9NRP0	149 aa		4.54	□□□□□ -1.68
GATM-209	ENST00000558916	NDUFA1	O15239	70 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	SRP19	P09132	144 aa	Known RBP	4.53	□□□□□ -1.68
GATM-209	ENST00000558916	KIAA0087	Q14695	138 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	PRR4	Q16378	134 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	GAGE2E	Q4V326	116 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	C9orf129	Q5T035	196 aa	Known RBP	4.53	□□□□□ -1.68
GATM-209	ENST00000558916	FAM104B	Q5XKR9	115 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	KIR2DL4	Q99706	377 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	SMDT1	Q9H4I9	107 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	GAGE2D	Q9UEU5	116 aa		4.53	□□□□□ -1.68
GATM-209	ENST00000558916	IGLV1-50	A0A075B6I6	118 aa		4.52	□□□□□ -1.69
GATM-209	ENST00000558916	ZNF727	A8MUV8	499 aa		4.52	□□□□□ -1.69
GATM-209	ENST00000558916		M0QXV9	152 aa		4.52	□□□□□ -1.69
GATM-209	ENST00000558916	TCAP	O15273	167 aa		4.52	□□□□□ -1.69
GATM-209	ENST00000558916	RIG	Q13278	110 aa		4.52	□□□□□ -1.69
GATM-209	ENST00000558916	TRBV24-1	A0A075B6N3	115 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	IFITM10	A6NMD0	228 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	PPP1R2P9	O14990	202 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	EIF4EBP3	O60516	100 aa	Predicted RBP	4.51	□□□□□ -1.69
GATM-209	ENST00000558916	TNFRSF6B	O95407	300 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	NPY	P01303	97 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	RPL23	P62829	140 aa	Known RBP	4.51	□□□□□ -1.69
GATM-209	ENST00000558916	BLOC1S1	P78537	153 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	LCE5A	Q5TCM9	118 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	C2orf82	Q6UX34	121 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	IMMP2L	Q96T52	175 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	SMIM2	Q9BVW6	85 aa		4.51	□□□□□ -1.69
GATM-209	ENST00000558916	SMIM27	A0A1W2PRY6	76 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916		C9JQL5	133 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916		D6R8Y8	96 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	UBE2D1	P51668	147 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	RPL32	P62910	135 aa	Known RBP	4.5	□□□□□ -1.69
GATM-209	ENST00000558916	UBE2B	P63146	152 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	HBB	P68871	147 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	MRPS36	P82909	103 aa	Known RBP	4.5	□□□□□ -1.69
GATM-209	ENST00000558916	SMAGP	Q0VAQ4	97 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	FAM74A3	Q4VXF1	159 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	ZC2HC1B	Q5TFG8	222 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	TMEM18	Q96B42	140 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	C20orf78	Q9BR46	151 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	EIF5A2	Q9GZV4	153 aa	Known RBP	4.5	□□□□□ -1.69
GATM-209	ENST00000558916	NAT8B	Q9UHF3	227 aa		4.5	□□□□□ -1.69
GATM-209	ENST00000558916	IGLV4-3	A0A075B6K6	122 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916		A0A087X002	238 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	KRTAP9-7	A8MTY7	169 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916		F8WDY8	70 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	PPP1R17	O96001	155 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	CKS2	P33552	79 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	TMEM241	Q24JQ0	296 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	LINC00242	Q5T6M2	205 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	MRPL54	Q6P161	138 aa	Known RBP	4.49	□□□□□ -1.69
GATM-209	ENST00000558916	SPANXA1	Q9NS26	97 aa		4.49	□□□□□ -1.69
GATM-209	ENST00000558916	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916		A0A1B0GXF2	115 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	LINC00862	A6NCI5	91 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	NDUFC2-KCTD14	E9PQ53	114 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	TSPAN13	O95857	204 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	SRSF3	P84103	164 aa	Known RBP	4.48	□□□□□ -1.69
GATM-209	ENST00000558916	ADIRF	Q15847	76 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	KRTAP5-3	Q6L8H2	238 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	LINC00173	Q6ZV60	143 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	LINC00469	Q8N7U9	141 aa		4.48	□□□□□ -1.69
GATM-209	ENST00000558916	TRBV30	A0A0K0K1B3	111 aa		4.47	□□□□□ -1.69
GATM-209	ENST00000558916	ZNF861P	O60384	105 aa		4.47	□□□□□ -1.69
GATM-209	ENST00000558916	RPL13A	P40429	203 aa	Known RBP	4.47	□□□□□ -1.69
GATM-209	ENST00000558916	hCG_2014768	A0A024R1R8	64 aa		4.46	□□□□□ -1.7
GATM-209	ENST00000558916	IFI27	P40305	119 aa	Predicted RBP	4.46	□□□□□ -1.7
GATM-209	ENST00000558916	AKAP14	Q86UN6	197 aa		4.46	□□□□□ -1.7
GATM-209	ENST00000558916	TMEM141	Q96I45	108 aa		4.46	□□□□□ -1.7
GATM-209	ENST00000558916	CTDSP1	Q9GZU7	261 aa		4.46	□□□□□ -1.7
GATM-209	ENST00000558916	XAGE1A	Q9HD64	81 aa		4.46	□□□□□ -1.7
GATM-209	ENST00000558916	ANAPC11	Q9NYG5	84 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms