RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
TPM1-216ENST00000558910 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
TPM1-216ENST00000558910 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
TPM1-216ENST00000558910 TMEM218A2RU14 115 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 RAB5AP20339 215 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 MALP21145 153 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 COX6A2Q02221 97 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 SDIM1Q6ZPB5 146 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 ATP5L2Q7Z4Y8 100 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 TMEM18Q96B42 140 aa7.7□□□□□ -1.18
TPM1-216ENST00000558910 TRBV24-1A0A075B6N3 115 aa7.69□□□□□ -1.18
TPM1-216ENST00000558910 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
TPM1-216ENST00000558910 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
TPM1-216ENST00000558910 PPBPP02775 128 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 PRSS3P2Q8NHM4 247 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
TPM1-216ENST00000558910 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 C1orf196B1AJZ1 125 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 COX7A2LO14548 114 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
TPM1-216ENST00000558910 NDUFA5Q16718 116 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 ZC2HC1BQ5TFG8 222 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 CTDSP1Q9GZU7 261 aa7.67□□□□□ -1.18
TPM1-216ENST00000558910 GVQW2A0A096LPI5 108 aaPredicted RBP7.66□□□□□ -1.18
TPM1-216ENST00000558910 IFITM10A6NMD0 228 aa7.66□□□□□ -1.18
TPM1-216ENST00000558910 IMMP2LQ96T52 175 aa7.66□□□□□ -1.18
TPM1-216ENST00000558910 IGLV4-69A0A075B6H9 119 aa7.65□□□□□ -1.18
TPM1-216ENST00000558910 A0A087WYN8 130 aa7.65□□□□□ -1.18
TPM1-216ENST00000558910 PHOX2AO14813 284 aa7.65□□□□□ -1.18
TPM1-216ENST00000558910 RPL32P62910 135 aaKnown RBP7.65□□□□□ -1.18
TPM1-216ENST00000558910 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
TPM1-216ENST00000558910 CARD19Q96LW7 228 aa7.65□□□□□ -1.18
TPM1-216ENST00000558910 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
TPM1-216ENST00000558910 IFI27P40305 119 aaPredicted RBP7.64□□□□□ -1.19
TPM1-216ENST00000558910 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
TPM1-216ENST00000558910 RPS10P5Q9NQ39 176 aa7.64□□□□□ -1.19
TPM1-216ENST00000558910 SPANXA1Q9NS26 97 aa7.64□□□□□ -1.19
TPM1-216ENST00000558910 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
TPM1-216ENST00000558910 A0A096LNI7 61 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 S100PP25815 95 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 GAGE2BQ13066 116 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 Q6ZRU5 148 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 STPG4Q8N801 248 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 Q8N8P6 123 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 FAM104AQ969W3 186 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 CAMK2N2Q96S95 79 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 TIMM21Q9BVV7 248 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 SEC11CQ9BY50 192 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
TPM1-216ENST00000558910 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
TPM1-216ENST00000558910 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
TPM1-216ENST00000558910 ORAOV1Q8WV07 137 aa7.62□□□□□ -1.19
TPM1-216ENST00000558910 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
TPM1-216ENST00000558910 HNRNPA3P51991 378 aaKnown RBP7.61□□□□□ -1.19
TPM1-216ENST00000558910 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
TPM1-216ENST00000558910 CYSLTR1Q9Y271 337 aa7.61□□□□□ -1.19
TPM1-216ENST00000558910 LRP1Q07954 4544 aaKnown RBP7.6□□□□□ -1.19
TPM1-216ENST00000558910 APOMO95445 188 aa7.6□□□□□ -1.19
TPM1-216ENST00000558910 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
TPM1-216ENST00000558910 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
TPM1-216ENST00000558910 TMEM141Q96I45 108 aa7.6□□□□□ -1.19
TPM1-216ENST00000558910 LAMTOR2Q9Y2Q5 125 aa7.6□□□□□ -1.19
TPM1-216ENST00000558910 TGIF2-C20orf24A0A0A6YYL0 155 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 APOC3P02656 99 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.19
TPM1-216ENST00000558910 FABP9Q0Z7S8 132 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 ORMDL2Q53FV1 153 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 TEX43Q6ZNM6 134 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
TPM1-216ENST00000558910 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
TPM1-216ENST00000558910 Q6ZN92 141 aa7.58□□□□□ -1.2
TPM1-216ENST00000558910 C7orf33Q8WU49 177 aa7.58□□□□□ -1.2
TPM1-216ENST00000558910 C2orf88Q9BSF0 95 aa7.58□□□□□ -1.2
TPM1-216ENST00000558910 VCX2Q9H322 139 aa7.58□□□□□ -1.2
TPM1-216ENST00000558910 NXT2Q9NPJ8 142 aaKnown RBP7.58□□□□□ -1.2
TPM1-216ENST00000558910 LOC107984640A0A0U1RRK4 108 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 SNAPINO95295 136 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 RHEBQ15382 184 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 SVBPQ8N300 66 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
TPM1-216ENST00000558910 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 C10orf25Q5T742 122 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 UNQ6190/PRO20217Q6UXQ8 127 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
TPM1-216ENST00000558910 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 UBE2D1P51668 147 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 C2orf82Q6UX34 121 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 LINC00173Q6ZV60 143 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 GNB1LQ9BYB4 327 aa7.55□□□□□ -1.2
TPM1-216ENST00000558910 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms