RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 IFNA1P01562 189 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 PNRC1Q12796 327 aaPredicted RBP3.52□□□□□ -1.85
SMAD3-209ENST00000558894 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
SMAD3-209ENST00000558894 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
SMAD3-209ENST00000558894 TRGC1P0CF51 173 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 RPL37AP61513 92 aaKnown RBP3.51□□□□□ -1.85
SMAD3-209ENST00000558894 TWIST1Q15672 202 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 COX19Q49B96 90 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 TEX43Q6ZNM6 134 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 FAM231DQ6ZW35 169 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 SPACA4Q8TDM5 124 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 ISOC2Q96AB3 205 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 TMEM243Q9BU79 118 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 NAT8Q9UHE5 227 aa3.51□□□□□ -1.85
SMAD3-209ENST00000558894 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 hDV102S1A0JD36 115 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 GAGE12HA6NDE8 117 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 TMEM250H0YL14 139 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 TNFRSF6BO95407 300 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 ESDP10768 282 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 AMTP48728 403 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 FOXI1Q12951 378 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 MRAP2Q96G30 205 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 RNF185Q96GF1 192 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 CTDSP1Q9GZU7 261 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 VCX2Q9H322 139 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 UQCR10Q9UDW1 63 aa3.5□□□□□ -1.85
SMAD3-209ENST00000558894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 A0A087WYN8 130 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 GVQW2A0A096LPI5 108 aaPredicted RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 IGKV2-29A2NJV5 120 aaPredicted RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 A4D1N5 150 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 H7C423 109 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 J3QR89 54 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 NCR2O95944 276 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 TSHBP01222 138 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 POLR2KP53803 58 aaKnown RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 CKS1BP61024 79 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 SRSF3P84103 164 aaKnown RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 VAMP3Q15836 100 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 PRSS3P2Q8NHM4 247 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
SMAD3-209ENST00000558894 LAMTOR2Q9Y2Q5 125 aa3.49□□□□□ -1.85
SMAD3-209ENST00000558894 IGHV3-64A0A075B6Q5 118 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 A0A1B0GW15 77 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 I3L3M4 83 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 TRGC2P03986 189 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 SRP19P09132 144 aaKnown RBP3.48□□□□□ -1.85
SMAD3-209ENST00000558894 FGF6P10767 208 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 COX6A2Q02221 97 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 FAM104AQ969W3 186 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 SIGMAR1Q99720 223 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
SMAD3-209ENST00000558894 A0A096LNI7 61 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 TRBV27A0A0K0K1C4 114 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 A8MWL6 223 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 C9JQL5 133 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 UBE2L6O14933 153 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 APCSP02743 223 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 HERV-K104P63124 156 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 MRPL54Q6P161 138 aaKnown RBP3.47□□□□□ -1.85
SMAD3-209ENST00000558894 Q6ZRU5 148 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 GTF2H5Q6ZYL4 71 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 NRACQ8N912 160 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 OR5A1Q8NGJ0 315 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 TSKUQ8WUA8 353 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 TMEM191AQ9H0A3 160 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 OSTCQ9NRP0 149 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 V9GYV3 84 aa3.47□□□□□ -1.85
SMAD3-209ENST00000558894 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
SMAD3-209ENST00000558894 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 F8WDY8 70 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 AMN1Q8IY45 258 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 STPG4Q8N801 248 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 NUP35Q8NFH5 326 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 ST20Q9HBF5 79 aa3.46□□□□□ -1.86
SMAD3-209ENST00000558894 LPAP08519 4548 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 A0A1B0GUT8 65 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 ZNF727A8MUV8 499 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 SMKR1H3BMG3 65 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 PMCHP20382 165 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 XCL1P47992 114 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 RPL23P62829 140 aaKnown RBP3.45□□□□□ -1.86
SMAD3-209ENST00000558894 PRR3P79522 188 aaKnown RBP3.45□□□□□ -1.86
SMAD3-209ENST00000558894 SRSF9Q13242 221 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMAD3-209ENST00000558894 PMCHL1Q16048 86 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 PDZD11Q5EBL8 140 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
SMAD3-209ENST00000558894 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms