RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 ST20Q9HBF5 79 aa6.84□□□□□ -1.31
SMAD3-206ENST00000558739 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
SMAD3-206ENST00000558739 A0A1B0GW15 77 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 TSHBP01222 138 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 APCSP02743 223 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 LINC00173Q6ZV60 143 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 NRACQ8N912 160 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 ANAPC11Q9NYG5 84 aa6.83□□□□□ -1.32
SMAD3-206ENST00000558739 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
SMAD3-206ENST00000558739 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
SMAD3-206ENST00000558739 PPP1R17O96001 155 aa6.82□□□□□ -1.32
SMAD3-206ENST00000558739 ZNF25P17030 456 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-206ENST00000558739 PMCHP20382 165 aa6.82□□□□□ -1.32
SMAD3-206ENST00000558739 MRPL51Q4U2R6 128 aaKnown RBP6.82□□□□□ -1.32
SMAD3-206ENST00000558739 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
SMAD3-206ENST00000558739 CLLU1Q5K131 121 aa6.82□□□□□ -1.32
SMAD3-206ENST00000558739 TRBV24-1A0A075B6N3 115 aa6.81□□□□□ -1.32
SMAD3-206ENST00000558739 LINC00862A6NCI5 91 aa6.81□□□□□ -1.32
SMAD3-206ENST00000558739 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
SMAD3-206ENST00000558739 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
SMAD3-206ENST00000558739 IFITM2Q01629 132 aa6.81□□□□□ -1.32
SMAD3-206ENST00000558739 MRPL52Q86TS9 123 aaKnown RBP6.81□□□□□ -1.32
SMAD3-206ENST00000558739 M0QXV9 152 aa6.8□□□□□ -1.32
SMAD3-206ENST00000558739 VCYO14598 125 aa6.8□□□□□ -1.32
SMAD3-206ENST00000558739 RAB14P61106 215 aa6.8□□□□□ -1.32
SMAD3-206ENST00000558739 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
SMAD3-206ENST00000558739 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
SMAD3-206ENST00000558739 UBE2BP63146 152 aa6.8□□□□□ -1.32
SMAD3-206ENST00000558739 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-206ENST00000558739 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
SMAD3-206ENST00000558739 PPP1R2P9O14990 202 aa6.79□□□□□ -1.32
SMAD3-206ENST00000558739 ZNF861PO60384 105 aa6.79□□□□□ -1.32
SMAD3-206ENST00000558739 HBBP68871 147 aa6.79□□□□□ -1.32
SMAD3-206ENST00000558739 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
SMAD3-206ENST00000558739 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
SMAD3-206ENST00000558739 C7orf77A4D0Y5 90 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 S100A8P05109 93 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 RNF151Q2KHN1 245 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 ATP5L2Q7Z4Y8 100 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 CDC42SE2Q9NRR3 84 aa6.78□□□□□ -1.32
SMAD3-206ENST00000558739 CSDC2Q9Y534 153 aaKnown RBP6.78□□□□□ -1.32
SMAD3-206ENST00000558739 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
SMAD3-206ENST00000558739 MRPL54Q6P161 138 aaKnown RBP6.77□□□□□ -1.33
SMAD3-206ENST00000558739 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
SMAD3-206ENST00000558739 TMEM101Q96IK0 257 aa6.77□□□□□ -1.33
SMAD3-206ENST00000558739 BTF3L4Q96K17 158 aa6.77□□□□□ -1.33
SMAD3-206ENST00000558739 KIR2DL4Q99706 377 aa6.77□□□□□ -1.33
SMAD3-206ENST00000558739 F8W036 122 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 TNFRSF6BO95407 300 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 PPBPP02775 128 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 MALP21145 153 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 CKS2P33552 79 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 GAGE2EQ4V326 116 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 UQCC3Q6UW78 93 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 C2orf48Q96LS8 159 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 GAGE2DQ9UEU5 116 aa6.76□□□□□ -1.33
SMAD3-206ENST00000558739 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 D6R8Y8 96 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 TCAPO15273 167 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 MT-ND4LP03901 98 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 CFC1BP0CG36 223 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 ADCYAP1P18509 176 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 FCER1GP30273 86 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 SMIM2Q9BVW6 85 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
SMAD3-206ENST00000558739 COX7A2LO14548 114 aa6.74□□□□□ -1.33
SMAD3-206ENST00000558739 NPYP01303 97 aa6.74□□□□□ -1.33
SMAD3-206ENST00000558739 SS18Q15532 418 aa6.74□□□□□ -1.33
SMAD3-206ENST00000558739 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
SMAD3-206ENST00000558739 TMEM136Q6ZRR5 245 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 ORMDL3Q8N138 153 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
SMAD3-206ENST00000558739 TMEM18Q96B42 140 aa6.72□□□□□ -1.33
SMAD3-206ENST00000558739 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
SMAD3-206ENST00000558739 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
SMAD3-206ENST00000558739 LAMTOR2Q9Y2Q5 125 aa6.72□□□□□ -1.33
SMAD3-206ENST00000558739 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
SMAD3-206ENST00000558739 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
SMAD3-206ENST00000558739 LINC00337Q8N6G1 96 aa6.71□□□□□ -1.34
SMAD3-206ENST00000558739 PRELID3AQ96N28 172 aa6.71□□□□□ -1.34
SMAD3-206ENST00000558739 SEC11CQ9BY50 192 aa6.71□□□□□ -1.34
SMAD3-206ENST00000558739 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
SMAD3-206ENST00000558739 MRPL35Q9NZE8 188 aaKnown RBP6.71□□□□□ -1.34
SMAD3-206ENST00000558739 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
SMAD3-206ENST00000558739 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms