RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SPACA4Q8TDM5 124 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 COX6A2Q02221 97 aa6.42□□□□□ -1.38
USP3-207ENST00000558218 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
USP3-207ENST00000558218 PRSS47A8MTI9 375 aa6.41□□□□□ -1.38
USP3-207ENST00000558218 D6R8Y8 96 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 F8WDY8 70 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 COX7A2LO14548 114 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 APOMO95445 188 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 MT-ND4LP03901 98 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 MALP21145 153 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
USP3-207ENST00000558218 SYCNQ0VAF6 134 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 MRPL54Q6P161 138 aaKnown RBP6.4□□□□□ -1.38
USP3-207ENST00000558218 Q6ZRU5 148 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 ORMDL3Q8N138 153 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 PRSS3P2Q8NHM4 247 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 C7orf33Q8WU49 177 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 SMIM2Q9BVW6 85 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 LAMTOR2Q9Y2Q5 125 aa6.4□□□□□ -1.38
USP3-207ENST00000558218 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 RAB5AP20339 215 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 TMEM136Q6ZRR5 245 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 CARD19Q96LW7 228 aa6.39□□□□□ -1.39
USP3-207ENST00000558218 NPYP01303 97 aa6.38□□□□□ -1.39
USP3-207ENST00000558218 MAJINQ3KP22 176 aa6.38□□□□□ -1.39
USP3-207ENST00000558218 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
USP3-207ENST00000558218 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
USP3-207ENST00000558218 IGLV4-69A0A075B6H9 119 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 K7EMI3 77 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 CLLU1Q5K131 121 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 STPG4Q8N801 248 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 PRELID3AQ96N28 172 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 IMMP2LQ96T52 175 aa6.37□□□□□ -1.39
USP3-207ENST00000558218 A0A096LNI7 61 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 IGKV2-24A0A0C4DH68 120 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 IFI27P40305 119 aaPredicted RBP6.36□□□□□ -1.39
USP3-207ENST00000558218 Q6ZUT4 128 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 OR10D4PQ8NGN7 298 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
USP3-207ENST00000558218 NPSP0C0P6 89 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 G0S2P27469 103 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 HNRNPA3P51991 378 aaKnown RBP6.35□□□□□ -1.39
USP3-207ENST00000558218 RPL39P62891 51 aaKnown RBP6.35□□□□□ -1.39
USP3-207ENST00000558218 UQCC3Q6UW78 93 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 C5orf38Q86SI9 138 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 LINC00526Q96FQ7 95 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
USP3-207ENST00000558218 PTTG1IPP53801 180 aa6.34□□□□□ -1.39
USP3-207ENST00000558218 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
USP3-207ENST00000558218 Q8N8P6 123 aa6.34□□□□□ -1.39
USP3-207ENST00000558218 MAP1LC3AQ9H492 121 aa6.34□□□□□ -1.39
USP3-207ENST00000558218 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
USP3-207ENST00000558218 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
USP3-207ENST00000558218 LINC01561Q8N1V8 128 aa6.33□□□□□ -1.4
USP3-207ENST00000558218 CTDSP1Q9GZU7 261 aa6.33□□□□□ -1.4
USP3-207ENST00000558218 MRPL35Q9NZE8 188 aaKnown RBP6.33□□□□□ -1.4
USP3-207ENST00000558218 A0A087WZ39 114 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 IFITM10A6NMD0 228 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 TMEM141Q96I45 108 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
USP3-207ENST00000558218 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
USP3-207ENST00000558218 NXT2Q9NPJ8 142 aaKnown RBP6.32□□□□□ -1.4
USP3-207ENST00000558218 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 TMEM218A2RU14 115 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 NDUFA1O15239 70 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
USP3-207ENST00000558218 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 TEX43Q6ZNM6 134 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 Q6ZRP5 223 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 ORAOV1Q8WV07 137 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
USP3-207ENST00000558218 LOC389332A0A1B0GUA5 103 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.3□□□□□ -1.4
USP3-207ENST00000558218 PAPPA-AS1Q5QFB9 102 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 C2orf66Q6UXQ4 117 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 Q6ZN92 141 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 C2orf88Q9BSF0 95 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 SEC11CQ9BY50 192 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 VCX2Q9H322 139 aa6.3□□□□□ -1.4
USP3-207ENST00000558218 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
USP3-207ENST00000558218 SEC11AP67812 179 aa6.29□□□□□ -1.4
USP3-207ENST00000558218 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP3-207ENST00000558218 COX19Q49B96 90 aa6.29□□□□□ -1.4
USP3-207ENST00000558218 FAM19A3Q7Z5A8 133 aa6.29□□□□□ -1.4
USP3-207ENST00000558218 AMELXQ99217 191 aa6.29□□□□□ -1.4
USP3-207ENST00000558218 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms