RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 A0A0J9YXV3 536 aa9.07□□□□□ -0.96
SHMT2-235ENST00000557740 A0A1B0GXF2 115 aa9.07□□□□□ -0.96
SHMT2-235ENST00000557740 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
SHMT2-235ENST00000557740 PPBPP02775 128 aa9.07□□□□□ -0.96
SHMT2-235ENST00000557740 ORAOV1Q8WV07 137 aa9.07□□□□□ -0.96
SHMT2-235ENST00000557740 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
SHMT2-235ENST00000557740 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
SHMT2-235ENST00000557740 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
SHMT2-235ENST00000557740 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-235ENST00000557740 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-235ENST00000557740 F8WDY8 70 aa9.05□□□□□ -0.96
SHMT2-235ENST00000557740 MT-ND6P03923 174 aa9.05□□□□□ -0.96
SHMT2-235ENST00000557740 RAB5AP20339 215 aa9.05□□□□□ -0.96
SHMT2-235ENST00000557740 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
SHMT2-235ENST00000557740 TGIF2-C20orf24A0A0A6YYL0 155 aa9.04□□□□□ -0.96
SHMT2-235ENST00000557740 NDUFA1O15239 70 aa9.04□□□□□ -0.96
SHMT2-235ENST00000557740 IFI27P40305 119 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-235ENST00000557740 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.96
SHMT2-235ENST00000557740 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
SHMT2-235ENST00000557740 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
SHMT2-235ENST00000557740 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
SHMT2-235ENST00000557740 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
SHMT2-235ENST00000557740 TMEM136Q6ZRR5 245 aa9.03□□□□□ -0.96
SHMT2-235ENST00000557740 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
SHMT2-235ENST00000557740 IMMP2LQ96T52 175 aa9.03□□□□□ -0.96
SHMT2-235ENST00000557740 ODF1Q14990 250 aa9.02□□□□□ -0.97
SHMT2-235ENST00000557740 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
SHMT2-235ENST00000557740 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
SHMT2-235ENST00000557740 TNXBP22105 4242 aa9□□□□□ -0.97
SHMT2-235ENST00000557740 KRTAP10-8P60410 259 aa9□□□□□ -0.97
SHMT2-235ENST00000557740 C1orf137Q5JT78 98 aa9□□□□□ -0.97
SHMT2-235ENST00000557740 IGLV4-3A0A075B6K6 122 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 C10orf25Q5T742 122 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
SHMT2-235ENST00000557740 A0A087WZ39 114 aa8.98□□□□□ -0.97
SHMT2-235ENST00000557740 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
SHMT2-235ENST00000557740 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
SHMT2-235ENST00000557740 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-235ENST00000557740 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
SHMT2-235ENST00000557740 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
SHMT2-235ENST00000557740 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 TLX1NBP0CAT3 122 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 PNRC1Q12796 327 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-235ENST00000557740 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 Q6ZN92 141 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 C2orf88Q9BSF0 95 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
SHMT2-235ENST00000557740 FAM168BA1KXE4 195 aa8.96□□□□□ -0.98
SHMT2-235ENST00000557740 MT-ND4LP03901 98 aa8.96□□□□□ -0.98
SHMT2-235ENST00000557740 TRBV30A0A0K0K1B3 111 aa8.95□□□□□ -0.98
SHMT2-235ENST00000557740 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
SHMT2-235ENST00000557740 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
SHMT2-235ENST00000557740 DIRC1Q969H9 104 aa8.95□□□□□ -0.98
SHMT2-235ENST00000557740 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
SHMT2-235ENST00000557740 PACRGQ96M98 296 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-235ENST00000557740 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
SHMT2-235ENST00000557740 UBE2D1P51668 147 aa8.94□□□□□ -0.98
SHMT2-235ENST00000557740 LRP2P98164 4655 aa8.94□□□□□ -0.98
SHMT2-235ENST00000557740 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
SHMT2-235ENST00000557740 Q8N8P6 123 aa8.94□□□□□ -0.98
SHMT2-235ENST00000557740 M0QXV9 152 aa8.93□□□□□ -0.98
SHMT2-235ENST00000557740 RAB14P61106 215 aa8.93□□□□□ -0.98
SHMT2-235ENST00000557740 UBE2BP63146 152 aa8.93□□□□□ -0.98
SHMT2-235ENST00000557740 ORMDL2Q53FV1 153 aa8.93□□□□□ -0.98
SHMT2-235ENST00000557740 C2orf82Q6UX34 121 aa8.93□□□□□ -0.98
SHMT2-235ENST00000557740 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
SHMT2-235ENST00000557740 PRSS2P07478 247 aa8.92□□□□□ -0.98
SHMT2-235ENST00000557740 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
SHMT2-235ENST00000557740 VCX2Q9H322 139 aa8.92□□□□□ -0.98
SHMT2-235ENST00000557740 ZC2HC1BQ5TFG8 222 aa8.91□□□□□ -0.98
SHMT2-235ENST00000557740 LINC00173Q6ZV60 143 aa8.91□□□□□ -0.98
SHMT2-235ENST00000557740 NXT2Q9NPJ8 142 aaKnown RBP8.91□□□□□ -0.98
SHMT2-235ENST00000557740 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
SHMT2-235ENST00000557740 H0Y9J4 135 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 K7EMI3 77 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 NPSP0C0P6 89 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 CKS1BP61024 79 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 AMELXQ99217 191 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 CTDSP1Q9GZU7 261 aa8.9□□□□□ -0.98
SHMT2-235ENST00000557740 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
SHMT2-235ENST00000557740 SEC11AP67812 179 aa8.88□□□□□ -0.99
SHMT2-235ENST00000557740 C6orf226Q5I0X4 101 aa8.88□□□□□ -0.99
SHMT2-235ENST00000557740 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
SHMT2-235ENST00000557740 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
SHMT2-235ENST00000557740 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
SHMT2-235ENST00000557740 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
SHMT2-235ENST00000557740 G0S2P27469 103 aa8.87□□□□□ -0.99
SHMT2-235ENST00000557740 HERVK_113P63121 156 aa8.87□□□□□ -0.99
SHMT2-235ENST00000557740 Q8IZM0 81 aa8.87□□□□□ -0.99
SHMT2-235ENST00000557740 ALKBH7Q9BT30 221 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-235ENST00000557740 GEMIN7Q9H840 131 aaKnown RBP8.87□□□□□ -0.99
SHMT2-235ENST00000557740 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
SHMT2-235ENST00000557740 IGLV1-50A0A075B6I6 118 aa8.85□□□□□ -0.99
SHMT2-235ENST00000557740 LINC00469Q8N7U9 141 aa8.85□□□□□ -0.99
SHMT2-235ENST00000557740 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms