RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 C2orf66Q6UXQ4 117 aa8.08□□□□□ -1.12
SLIRP-211ENST00000557623 HSPG2P98160 4391 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 NPSP0C0P6 89 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 MALP21145 153 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 HAMPP81172 84 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 TMEM141Q96I45 108 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 ALKBH7Q9BT30 221 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-211ENST00000557623 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
SLIRP-211ENST00000557623 TGIF2-C20orf24A0A0A6YYL0 155 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 IFITM10A6NMD0 228 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 APOMO95445 188 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 SLPIP03973 132 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 Q6ZN92 141 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 OPRPNQ99935 248 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-211ENST00000557623 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 TRAPPC1Q9Y5R8 145 aa8.06□□□□□ -1.12
SLIRP-211ENST00000557623 IGLV4-3A0A075B6K6 122 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 LINC01549A6NIU2 74 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
SLIRP-211ENST00000557623 TEX43Q6ZNM6 134 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 C2orf88Q9BSF0 95 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
SLIRP-211ENST00000557623 PAPPA-AS1Q5QFB9 102 aa8.04□□□□□ -1.12
SLIRP-211ENST00000557623 Q5VSD8 79 aa8.04□□□□□ -1.12
SLIRP-211ENST00000557623 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SLIRP-211ENST00000557623 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
SLIRP-211ENST00000557623 LINC01546A6NGU7 62 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 VCX2Q9H322 139 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 SMCO4Q9NRQ5 59 aa8.03□□□□□ -1.12
SLIRP-211ENST00000557623 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
SLIRP-211ENST00000557623 AMELXQ99217 191 aa8.02□□□□□ -1.13
SLIRP-211ENST00000557623 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
SLIRP-211ENST00000557623 UBE2D1P51668 147 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 ERASQ7Z444 233 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
SLIRP-211ENST00000557623 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 IGLV4-69A0A075B6H9 119 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
SLIRP-211ENST00000557623 COX6A2Q02221 97 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SLIRP-211ENST00000557623 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 DPH3Q96FX2 82 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 C2orf48Q96LS8 159 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
SLIRP-211ENST00000557623 F8WDY8 70 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 SEC11AP67812 179 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 ORAOV1Q8WV07 137 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 YPEL4Q96NS1 127 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
SLIRP-211ENST00000557623 A0A087WZ39 114 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 LINC00614P0C842 121 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 RAB5BP61020 215 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
SLIRP-211ENST00000557623 PANO1I0J062 215 aa7.97□□□□□ -1.13
SLIRP-211ENST00000557623 ZC2HC1BQ5TFG8 222 aa7.97□□□□□ -1.13
SLIRP-211ENST00000557623 SPACA4Q8TDM5 124 aa7.97□□□□□ -1.13
SLIRP-211ENST00000557623 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 HERVK_113P63121 156 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 Q6ZRU5 148 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
SLIRP-211ENST00000557623 A0A087WYN8 130 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 LOC107984640A0A0U1RRK4 108 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 NDUFA1O15239 70 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
SLIRP-211ENST00000557623 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
SLIRP-211ENST00000557623 A0A096LNI7 61 aa7.94□□□□□ -1.14
SLIRP-211ENST00000557623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-211ENST00000557623 HBDP02042 147 aa7.94□□□□□ -1.14
SLIRP-211ENST00000557623 PMVKQ15126 192 aa7.94□□□□□ -1.14
SLIRP-211ENST00000557623 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
SLIRP-211ENST00000557623 MRPL35Q9NZE8 188 aaKnown RBP7.94□□□□□ -1.14
SLIRP-211ENST00000557623 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
SLIRP-211ENST00000557623 PACRGQ96M98 296 aaPredicted RBP7.93□□□□□ -1.14
SLIRP-211ENST00000557623 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
SLIRP-211ENST00000557623 TINCRA0A1B0GVN0 87 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms