RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SDIM1Q6ZPB5 146 aa6.3□□□□□ -1.4
HNRNPC-228ENST00000557033 SMDT1Q9H4I9 107 aa6.3□□□□□ -1.4
HNRNPC-228ENST00000557033 ST20Q9HBF5 79 aa6.3□□□□□ -1.4
HNRNPC-228ENST00000557033 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 PPP1R17O96001 155 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 FGF6P10767 208 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 RAB4AP20338 218 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 Q8NBF4 154 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 V9GYV3 84 aa6.29□□□□□ -1.4
HNRNPC-228ENST00000557033 TRBV27A0A0K0K1C4 114 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 A0A1B0GVG6 124 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 ESDP10768 282 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 PEA15Q15121 130 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 ISOC2Q96AB3 205 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 RNF185Q96GF1 192 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 BTF3L4Q96K17 158 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 NAT8BQ9UHF3 227 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
HNRNPC-228ENST00000557033 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 GAS8-AS1O95177 125 aa6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 OR5A1Q8NGJ0 315 aa6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
HNRNPC-228ENST00000557033 IGKV3OR2-268A0A0C4DH90 116 aa6.26□□□□□ -1.41
HNRNPC-228ENST00000557033 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
HNRNPC-228ENST00000557033 MRPL52Q86TS9 123 aaKnown RBP6.26□□□□□ -1.41
HNRNPC-228ENST00000557033 CHCHD10Q8WYQ3 142 aaPredicted RBP6.26□□□□□ -1.41
HNRNPC-228ENST00000557033 LITAFQ99732 161 aa6.26□□□□□ -1.41
HNRNPC-228ENST00000557033 A0A1B0GW15 77 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 SMIM27A0A1W2PRY6 76 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 LINC00862A6NCI5 91 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 C9JQL5 133 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 RPS10P46783 165 aaKnown RBP6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 ADIRFQ15847 76 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 C15orf56Q8N910 161 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 DPH3Q96FX2 82 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 CDC42SE2Q9NRR3 84 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 TMEM242Q9NWH2 141 aa6.25□□□□□ -1.41
HNRNPC-228ENST00000557033 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 LINC00959A0A1B0GUT2 108 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 C7orf77A4D0Y5 90 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 PANO1I0J062 215 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 PPP1R2P9O14990 202 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 RPL37AP61513 92 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 SS18Q15532 418 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 FAM104BQ5XKR9 115 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 ZNF664Q8N3J9 261 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
HNRNPC-228ENST00000557033 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 CCL25O15444 150 aa6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 OXTP01178 125 aa6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 FCER1GP30273 86 aa6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 RPL32P62910 135 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-228ENST00000557033 TRBV24-1A0A075B6N3 115 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 IGHV1-58A0A0C4DH39 117 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 SMKR1H3BMG3 65 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 TCAPO15273 167 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 S100A8P05109 93 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 XCL1P47992 114 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
HNRNPC-228ENST00000557033 DMBT1Q9UGM3 2413 aaPredicted RBP6.21□□□□□ -1.41
HNRNPC-228ENST00000557033 A0A087WYN8 130 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 C1orf196B1AJZ1 125 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 F8W036 122 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 CKS2P33552 79 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 COX6A2Q02221 97 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 PKIGQ9Y2B9 76 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 UBE2D4Q9Y2X8 147 aa6.21□□□□□ -1.42
HNRNPC-228ENST00000557033 PPBPP02775 128 aa6.2□□□□□ -1.42
HNRNPC-228ENST00000557033 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
HNRNPC-228ENST00000557033 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
HNRNPC-228ENST00000557033 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
HNRNPC-228ENST00000557033 PHOX2AO14813 284 aa6.19□□□□□ -1.42
HNRNPC-228ENST00000557033 HBBP68871 147 aa6.19□□□□□ -1.42
HNRNPC-228ENST00000557033 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
HNRNPC-228ENST00000557033 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
HNRNPC-228ENST00000557033 A0A1B0GXF2 115 aa6.18□□□□□ -1.42
HNRNPC-228ENST00000557033 MRPL54Q6P161 138 aaKnown RBP6.18□□□□□ -1.42
HNRNPC-228ENST00000557033 Q6ZRU5 148 aa6.18□□□□□ -1.42
HNRNPC-228ENST00000557033 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
HNRNPC-228ENST00000557033 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
HNRNPC-228ENST00000557033 D6R8Y8 96 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms