RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 NAIPQ13075 1403 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 A0A1B0GUL6 1792 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 IGHV1-24A0A0C4DH33 117 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 HIGD1CA8MV81 97 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 EVI2AP22794 236 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 SPINK13Q1W4C9 94 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 C6orf52Q5T4I8 152 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 C10orf99Q6UWK7 81 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 TAC4Q86UU9 113 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 PLAC4Q8WY50 150 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 CALML5Q9NZT1 146 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 USF3Q68DE3 2245 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 MED23Q9ULK4 1368 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 CCDC141Q6ZP82 1450 aa0.78□□□□□ -2.28
CDKN3-210ENST00000556305 CDK5RAP2Q96SN8 1893 aa0.78□□□□□ -2.29
CDKN3-210ENST00000556305 DNAH2Q9P225 4427 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 TPST1O60507 370 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 IGF2P01344 180 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 PCBD1P61457 104 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 CSAG1Q6PB30 78 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
CDKN3-210ENST00000556305 MAGOHBQ96A72 148 aaKnown RBP0.77□□□□□ -2.29
CDKN3-210ENST00000556305 LPAP08519 4548 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 A0A0D9SG42 100 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 A0A0G2JMM0 328 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 PAEPP09466 180 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 NBEAP1P0C6P0 100 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 HSD17B12Q53GQ0 312 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 OTOSQ8NHW6 89 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 DMAC1Q96GE9 116 aa0.76□□□□□ -2.29
CDKN3-210ENST00000556305 TNXBP22105 4242 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 A0A1B0GX51 115 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 DEGS1O15121 323 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 SMIM24O75264 130 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 SLC25A5P05141 298 aaKnown RBP0.75□□□□□ -2.29
CDKN3-210ENST00000556305 SDC4P31431 198 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 UNQ5815/PRO19632Q6UWF5 114 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 LYPD5Q6UWN5 251 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 COMMD3Q9UBI1 195 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 DNAH17Q9UFH2 4485 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 IQGAP3Q86VI3 1631 aa0.75□□□□□ -2.29
CDKN3-210ENST00000556305 TRAV36DV7A0A075B6V5 113 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 BORCS7-ASMTA0A0B4J1R7 106 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 CDC42EP2O14613 210 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 TCRAP04437 139 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 CMPK1P30085 196 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 SPINK7P58062 85 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 AKAP14Q86UN6 197 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 AIF1LQ9BQI0 150 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 VPS25Q9BRG1 176 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 ATG5Q9H1Y0 275 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 METTL1Q9UBP6 276 aaKnown RBP0.74□□□□□ -2.29
CDKN3-210ENST00000556305 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
CDKN3-210ENST00000556305 DOCK2Q92608 1830 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 MUC17Q685J3 4493 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 GCC2Q8IWJ2 1684 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 DBIP07108 87 aaKnown RBP0.73□□□□□ -2.29
CDKN3-210ENST00000556305 IL7P13232 177 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 OR8B8Q15620 311 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 KRTAP19-6Q3LI70 58 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 CCDC153Q494R4 210 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 TCTE3Q8IZS6 198 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 OR4S1Q8NGB4 309 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 PYDC1Q8WXC3 89 aa0.73□□□□□ -2.29
CDKN3-210ENST00000556305 HELZP42694 1942 aaKnown RBP0.73□□□□□ -2.29
CDKN3-210ENST00000556305 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
CDKN3-210ENST00000556305 SCTP09683 121 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 ADCYAP1P18509 176 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 POLR2JP52435 117 aaKnown RBP0.72□□□□□ -2.29
CDKN3-210ENST00000556305 PLGLB1Q02325 96 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 FXYD3Q14802 87 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 GLYATL3Q5SZD4 288 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 PPLO60437 1756 aa0.72□□□□□ -2.29
CDKN3-210ENST00000556305 EDC4Q6P2E9 1401 aaKnown RBP0.72□□□□□ -2.29
CDKN3-210ENST00000556305 PLXNB2O15031 1838 aa0.71□□□□□ -2.3
CDKN3-210ENST00000556305 IGKCP01834 107 aa0.71□□□□□ -2.3
CDKN3-210ENST00000556305 APOC1P02654 83 aa0.71□□□□□ -2.3
CDKN3-210ENST00000556305 LINC00208Q96KT6 92 aa0.71□□□□□ -2.3
CDKN3-210ENST00000556305 PLAC8Q9NZF1 115 aa0.71□□□□□ -2.3
CDKN3-210ENST00000556305 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 FXYD1O00168 92 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 YPEL1O60688 119 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 TNFSF15O95150 251 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 SCGB1A1P11684 91 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 COX6B1P14854 86 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 TMEM244Q5VVB8 128 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 PPP1R1CQ8WVI7 109 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 SLC35B3Q9H1N7 401 aa0.7□□□□□ -2.3
CDKN3-210ENST00000556305 TRAV2A0A0B4J234 112 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 C9JAW5 83 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 RBP4P02753 201 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 MT-ND4LP03901 98 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 CCKP06307 115 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 ZNF56Q15929 161 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 IQCJQ1A5X6 159 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 TMEM91Q6ZNR0 172 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 C5orf56Q8N8D9 126 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 PPDPFLQ8WWR9 84 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 TAS2R8Q9NYW2 309 aa0.69□□□□□ -2.3
CDKN3-210ENST00000556305 HIGD1AQ9Y241 93 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms