RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 LOC107984640A0A0U1RRK4 108 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 KANTRA0A1W2PQU2 76 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 TSHBP01222 138 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 PMCHP20382 165 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 SS18Q15532 418 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 NUP35Q8NFH5 326 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 OCC1Q8TAD7 63 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 TMEM101Q96IK0 257 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 MED9Q9NWA0 146 aa5.41□□□□□ -1.54
GTF2A1-204ENST00000556268 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 K7EN84 100 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 CAMPP49913 170 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 GAGE2BQ13066 116 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 C9orf116Q5BN46 136 aaPredicted RBP5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 Q75L30 129 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 BTF3L4Q96K17 158 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 RNASE7Q9H1E1 156 aaKnown RBP5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 RPP21Q9H633 154 aaKnown RBP5.4□□□□□ -1.54
GTF2A1-204ENST00000556268 TRBV27A0A0K0K1C4 114 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 C1orf196B1AJZ1 125 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 APOMO95445 188 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 EIF5AL1Q6IS14 154 aaKnown RBP5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 SMIM15Q7Z3B0 74 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 ISOC2Q96AB3 205 aa5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
GTF2A1-204ENST00000556268 TEX46H3BTG2 121 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 MT-ND6P03923 174 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 IGLV7-43P04211 117 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 BCL2P10415 239 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 MRAP2Q96G30 205 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 ST20Q9HBF5 79 aa5.38□□□□□ -1.55
GTF2A1-204ENST00000556268 COX7A2LO14548 114 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 RGS21Q2M5E4 152 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 FAM231DQ6ZW35 169 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 DIRC1Q969H9 104 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 TMEM242Q9NWH2 141 aa5.37□□□□□ -1.55
GTF2A1-204ENST00000556268 A8MWL6 223 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 KRTAP1-4P0C5Y4 121 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 RAB4AP20338 218 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 TAGLN2P37802 199 aaKnown RBP5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 TMEM191AQ9H0A3 160 aa5.36□□□□□ -1.55
GTF2A1-204ENST00000556268 IGLV1-50A0A075B6I6 118 aa5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 C7orf77A4D0Y5 90 aa5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 F8WDY8 70 aa5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 OPRPNQ99935 248 aaPredicted RBP5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 UBE2D4Q9Y2X8 147 aa5.35□□□□□ -1.55
GTF2A1-204ENST00000556268 H0Y9J4 135 aa5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 TMEM241Q24JQ0 296 aa5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 FAM104AQ969W3 186 aa5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
GTF2A1-204ENST00000556268 A0A087WZ39 114 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 A0A1B0GUT8 65 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 TMEM250H0YL14 139 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 OR10D4PQ8NGN7 298 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 IMMP2LQ96T52 175 aa5.33□□□□□ -1.56
GTF2A1-204ENST00000556268 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 FAM168BA1KXE4 195 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 HIGD1CA8MV81 97 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 PPP1R17O96001 155 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 AMN1Q8IY45 258 aa5.32□□□□□ -1.56
GTF2A1-204ENST00000556268 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
GTF2A1-204ENST00000556268 RNASE13Q5GAN3 156 aaKnown RBP5.31□□□□□ -1.56
GTF2A1-204ENST00000556268 SLC51BQ86UW2 128 aa5.31□□□□□ -1.56
GTF2A1-204ENST00000556268 CARHSP1Q9Y2V2 147 aaKnown RBP5.31□□□□□ -1.56
GTF2A1-204ENST00000556268 TRBV24-1A0A075B6N3 115 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 SMKR1H3BMG3 65 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 FCER1GP30273 86 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 RPL32P62910 135 aaKnown RBP5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 UNQ6190/PRO20217Q6UXQ8 127 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 BORCS7Q96B45 105 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 KIR2DL4Q99706 377 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 OSTCQ9NRP0 149 aa5.3□□□□□ -1.56
GTF2A1-204ENST00000556268 NDUFA1O15239 70 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 RPL13AP40429 203 aaKnown RBP5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 PRR4Q16378 134 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 FAM104BQ5XKR9 115 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 Q6ZUT4 128 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 LINC01551Q86U37 167 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 ORAOV1Q8WV07 137 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 C20orf78Q9BR46 151 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms