RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 IMMP2LQ96T52 175 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
VRK1-204ENST00000555351 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
VRK1-204ENST00000555351 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
VRK1-204ENST00000555351 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
VRK1-204ENST00000555351 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
VRK1-204ENST00000555351 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
VRK1-204ENST00000555351 UQCC3Q6UW78 93 aa7.45□□□□□ -1.22
VRK1-204ENST00000555351 NPSP0C0P6 89 aa7.44□□□□□ -1.22
VRK1-204ENST00000555351 IFI27P40305 119 aaPredicted RBP7.44□□□□□ -1.22
VRK1-204ENST00000555351 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
VRK1-204ENST00000555351 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
VRK1-204ENST00000555351 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
VRK1-204ENST00000555351 TRAV9-1A0A075B6T8 112 aa7.43□□□□□ -1.22
VRK1-204ENST00000555351 PTTG1IPP53801 180 aa7.43□□□□□ -1.22
VRK1-204ENST00000555351 C5orf38Q86SI9 138 aa7.43□□□□□ -1.22
VRK1-204ENST00000555351 Q8N8P6 123 aa7.43□□□□□ -1.22
VRK1-204ENST00000555351 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
VRK1-204ENST00000555351 G0S2P27469 103 aa7.42□□□□□ -1.22
VRK1-204ENST00000555351 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
VRK1-204ENST00000555351 ORMDL2Q53FV1 153 aa7.42□□□□□ -1.22
VRK1-204ENST00000555351 CTDSP1Q9GZU7 261 aa7.42□□□□□ -1.22
VRK1-204ENST00000555351 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
VRK1-204ENST00000555351 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
VRK1-204ENST00000555351 TGIF2-C20orf24A0A0A6YYL0 155 aa7.41□□□□□ -1.22
VRK1-204ENST00000555351 PRR3P79522 188 aaKnown RBP7.41□□□□□ -1.22
VRK1-204ENST00000555351 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
VRK1-204ENST00000555351 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
VRK1-204ENST00000555351 NXT2Q9NPJ8 142 aaKnown RBP7.41□□□□□ -1.22
VRK1-204ENST00000555351 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
VRK1-204ENST00000555351 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
VRK1-204ENST00000555351 A0A087WZ39 114 aa7.4□□□□□ -1.22
VRK1-204ENST00000555351 TMEM218A2RU14 115 aa7.4□□□□□ -1.22
VRK1-204ENST00000555351 ORAOV1Q8WV07 137 aa7.4□□□□□ -1.22
VRK1-204ENST00000555351 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
VRK1-204ENST00000555351 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
VRK1-204ENST00000555351 NDUFA1O15239 70 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 TLX1NBP0CAT3 122 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 TEX43Q6ZNM6 134 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 SEC11CQ9BY50 192 aa7.39□□□□□ -1.23
VRK1-204ENST00000555351 LOC389332A0A1B0GUA5 103 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 IFITM2Q01629 132 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 GAGE2BQ13066 116 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 PAPPA-AS1Q5QFB9 102 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 Q6ZN92 141 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 Q6ZRP5 223 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 AMELXQ99217 191 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
VRK1-204ENST00000555351 LINC01549A6NIU2 74 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 IGIPA6NJ69 53 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 ADCYAP1P18509 176 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 UBE2D1P51668 147 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
VRK1-204ENST00000555351 S100PP25815 95 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 SEC11AP67812 179 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 COX19Q49B96 90 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 VCX2Q9H322 139 aa7.36□□□□□ -1.23
VRK1-204ENST00000555351 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
VRK1-204ENST00000555351 A0A1W2PNN7 141 aa7.35□□□□□ -1.23
VRK1-204ENST00000555351 RPL18AQ02543 176 aaKnown RBP7.35□□□□□ -1.23
VRK1-204ENST00000555351 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
VRK1-204ENST00000555351 C9orf116Q5BN46 136 aaPredicted RBP7.35□□□□□ -1.23
VRK1-204ENST00000555351 LINC00173Q6ZV60 143 aa7.35□□□□□ -1.23
VRK1-204ENST00000555351 LINC01600Q96MT4 127 aa7.35□□□□□ -1.23
VRK1-204ENST00000555351 TIMM17AQ99595 171 aa7.35□□□□□ -1.23
VRK1-204ENST00000555351 C10orf91Q5T1B1 145 aa7.34□□□□□ -1.23
VRK1-204ENST00000555351 REG3GQ6UW15 175 aa7.34□□□□□ -1.23
VRK1-204ENST00000555351 TOMM6Q96B49 74 aa7.34□□□□□ -1.23
VRK1-204ENST00000555351 A0A0J9YXV3 536 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 LINC01546A6NGU7 62 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 MT-ND6P03923 174 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 HERVK_113P63121 156 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 ERASQ7Z444 233 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
VRK1-204ENST00000555351 ODF1Q14990 250 aa7.32□□□□□ -1.24
VRK1-204ENST00000555351 RHEBQ15382 184 aa7.32□□□□□ -1.24
VRK1-204ENST00000555351 CARHSP1Q9Y2V2 147 aaKnown RBP7.32□□□□□ -1.24
VRK1-204ENST00000555351 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
VRK1-204ENST00000555351 COMMD7Q86VX2 200 aa7.31□□□□□ -1.24
VRK1-204ENST00000555351 Q8IZM0 81 aa7.31□□□□□ -1.24
VRK1-204ENST00000555351 PACRGQ96M98 296 aaPredicted RBP7.31□□□□□ -1.24
VRK1-204ENST00000555351 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
VRK1-204ENST00000555351 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
VRK1-204ENST00000555351 PRSS2P07478 247 aa7.3□□□□□ -1.24
VRK1-204ENST00000555351 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
VRK1-204ENST00000555351 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
VRK1-204ENST00000555351 CKS1BP61024 79 aa7.29□□□□□ -1.24
VRK1-204ENST00000555351 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms