RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 CCL19Q99731 98 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 V9GYY9 64 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
SYNE3-203ENST00000554873 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
SYNE3-203ENST00000554873 NCR3O14931 201 aa11.21□□□□□ -0.62
SYNE3-203ENST00000554873 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.62
SYNE3-203ENST00000554873 H0YGX0 51 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 CCKP06307 115 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 COX6A2Q02221 97 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 PROK1P58294 105 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 HTN1P15515 57 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 BCE1O60756 84 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
SYNE3-203ENST00000554873 LECT2O14960 151 aa11.16□□□□□ -0.62
SYNE3-203ENST00000554873 PRM2P04554 102 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 Q9UF83 564 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 B4DSR2 109 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 Q6ZSN1 163 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 SS18Q15532 418 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
SYNE3-203ENST00000554873 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 JMJD7-PLA2G4BH0Y9G9 81 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 SLPIP03973 132 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 RPL36AP83881 106 aaKnown RBP11.1□□□□□ -0.63
SYNE3-203ENST00000554873 RPL36ALQ969Q0 106 aaKnown RBP11.1□□□□□ -0.63
SYNE3-203ENST00000554873 DEFB131AP59861 70 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 UBL5Q9BZL1 73 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 TRBV7-6A0A0J9YX20 115 aa11.08□□□□□ -0.63
SYNE3-203ENST00000554873 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.63
SYNE3-203ENST00000554873 ZANQ9Y493 2812 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 FLNCQ14315 2725 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 F8WEM9 126 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.64
SYNE3-203ENST00000554873 RMI2Q96E14 147 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 CSMD2Q7Z408 3487 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 ATP5EP56381 51 aaPredicted RBP11.06□□□□□ -0.64
SYNE3-203ENST00000554873 SNURFQ9Y675 71 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 SLURP1P55000 103 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 USP9XQ93008 2570 aaPredicted RBP11.06□□□□□ -0.64
SYNE3-203ENST00000554873 NDUFC1O43677 76 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 A8MTW9 85 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 DOPEY1Q5JWR5 2465 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 ZNF702PQ9H963 129 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 MAPK1IP1LQ8NDC0 245 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 UTP20O75691 2785 aaKnown RBP11.04□□□□□ -0.64
SYNE3-203ENST00000554873 PKD1L2Q7Z442 2459 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 C11orf72Q8NBR9 251 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
SYNE3-203ENST00000554873 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
SYNE3-203ENST00000554873 CCL18P55774 89 aa11.02□□□□□ -0.65
SYNE3-203ENST00000554873 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
SYNE3-203ENST00000554873 DSCR9P59020 149 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 LINC00158P58513 81 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 POLQO75417 2590 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 TMEM256-PLSCR3K7ERE1 68 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 Q96MF0 132 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 A0A096LNT2 108 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 Q6YL49 198 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
SYNE3-203ENST00000554873 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
SYNE3-203ENST00000554873 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms