RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 Q9H8V8 135 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 CYSLTR1Q9Y271 337 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 IGLV4-60A0A075B6I1 120 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 TMEM262E9PQX1 116 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 UBE2L6O14933 153 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 DNAH10OSP0CZ25 163 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 FGF6P10767 208 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 RBX1P62877 108 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 PDZD11Q5EBL8 140 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 LINC01556Q5JQF7 62 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
SCFD1-212ENST00000554486 HYDINQ4G0P3 5121 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 SIVA1O15304 175 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 HSBP1O75506 76 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 IGHV3-33P01772 117 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 HBDP02042 147 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 G0S2P27469 103 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 PKIAP61925 76 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 Q6ZUT4 128 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 LINC00173Q6ZV60 143 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 Q8N976 141 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 LITAFQ99732 161 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-212ENST00000554486 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 CSDC2Q9Y534 153 aaKnown RBP4.22□□□□□ -1.73
SCFD1-212ENST00000554486 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
SCFD1-212ENST00000554486 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 A0A087WX48 190 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 A0A087X002 238 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 LY6G6CO95867 125 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 S100A6P06703 90 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 ZNF25P17030 456 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-212ENST00000554486 MRPS36P82909 103 aaKnown RBP4.21□□□□□ -1.74
SCFD1-212ENST00000554486 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
SCFD1-212ENST00000554486 ZC2HC1BQ5TFG8 222 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 ERASQ7Z444 233 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 HIST3H2BBQ8N257 126 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 TIMM17AQ99595 171 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 KLK12Q9UKR0 248 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
SCFD1-212ENST00000554486 LINC01549A6NIU2 74 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 ATP5LO75964 103 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 ANGP03950 147 aaKnown RBP4.2□□□□□ -1.74
SCFD1-212ENST00000554486 FABP4P15090 132 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 SMAGPQ0VAQ4 97 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 ENHOQ6UWT2 76 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 LINC00269Q8N2A0 174 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 IFI27L1Q96BM0 104 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 TMEM101Q96IK0 257 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 PACRGQ96M98 296 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-212ENST00000554486 AMELXQ99217 191 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 DNAH2Q9P225 4427 aa4.2□□□□□ -1.74
SCFD1-212ENST00000554486 DNAH10Q8IVF4 4471 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 NBDYA0A0U1RRE5 68 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 LCE6AA0A183 80 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 IBA57-AS1B1ANH7 110 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-212ENST00000554486 LEPROTL1O95214 131 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 CLPSL2Q6UWE3 100 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 Q6ZR54 194 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 BAALCQ8WXS3 180 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 HIST1H2BLQ99880 126 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 RYR2Q92736 4967 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 DNAH17Q9UFH2 4485 aa4.19□□□□□ -1.74
SCFD1-212ENST00000554486 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 LINC00959A0A1B0GUT2 108 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 K7EP13 123 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 M0R2N4 97 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 REG3AQ06141 175 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 TTC32Q5I0X7 151 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 C10orf126Q8N4M7 172 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 VCX2Q9H322 139 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
SCFD1-212ENST00000554486 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
SCFD1-212ENST00000554486 TRAV13-1A0A0B4J241 112 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 C3orf79P0CE67 100 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 S100A2P29034 98 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 UBE2D1P51668 147 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 PMVKQ15126 192 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-212ENST00000554486 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 KRTAP26-1Q6PEX3 210 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms