RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PCP4P48539 62 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 POLR2KP53803 58 aaKnown RBP6.02□□□□□ -1.45
TDP1-208ENST00000553989 ZNF415Q09FC8 603 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 PRR9Q5T870 116 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 NEGR1Q7Z3B1 354 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 HIST1H4GQ99525 98 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 VPS25Q9BRG1 176 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 LINC00467Q9BRT7 94 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 A0A087WTM6 91 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 TRAV26-2A0A0B4J265 109 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 J3QR89 54 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 MGPP08493 103 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 CRYBA4P53673 196 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 PMVKQ15126 192 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 RHOHQ15669 191 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 TP73-AS1Q9UF72 201 aa6.01□□□□□ -1.45
TDP1-208ENST00000553989 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
TDP1-208ENST00000553989 A0A1B0GWB2 263 aa6□□□□□ -1.45
TDP1-208ENST00000553989 F5H697 171 aa6□□□□□ -1.45
TDP1-208ENST00000553989 PSCAO43653 123 aa6□□□□□ -1.45
TDP1-208ENST00000553989 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
TDP1-208ENST00000553989 XGP55808 180 aa6□□□□□ -1.45
TDP1-208ENST00000553989 KRTAP10-1P60331 282 aa6□□□□□ -1.45
TDP1-208ENST00000553989 RNF151Q2KHN1 245 aa6□□□□□ -1.45
TDP1-208ENST00000553989 PIK3CD-AS1Q5SR53 167 aa6□□□□□ -1.45
TDP1-208ENST00000553989 WFDC10BQ8IUB3 73 aa6□□□□□ -1.45
TDP1-208ENST00000553989 BAALCQ8WXS3 180 aa6□□□□□ -1.45
TDP1-208ENST00000553989 RAB37Q96AX2 223 aa6□□□□□ -1.45
TDP1-208ENST00000553989 TRGV11A0A075B6L2 103 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 IGHV3-16A0A0C4DH30 117 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 TRBV27A0A0K0K1C4 114 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 IGIPA6NJ69 53 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 K7EQD1 137 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
TDP1-208ENST00000553989 FXYD2P54710 66 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 FHL2Q14192 279 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 GAGE13Q4V321 117 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 Q6ZQT7 251 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 PTH2Q96A98 100 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 C9orf85Q96MD7 179 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 C1orf43Q9BWL3 253 aa5.99□□□□□ -1.45
TDP1-208ENST00000553989 TRBV7-3A0A075B6L6 115 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 IGLV5-52A0A0A0MRZ9 124 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 CRYGDP07320 174 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 HAMPP81172 84 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 COTL1Q14019 142 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 LYRM7Q5U5X0 104 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 RPL39LQ96EH5 51 aaKnown RBP5.98□□□□□ -1.45
TDP1-208ENST00000553989 ZNF479Q96JC4 524 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
TDP1-208ENST00000553989 MDFICQ9P1T7 246 aa5.98□□□□□ -1.45
TDP1-208ENST00000553989 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
TDP1-208ENST00000553989 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
TDP1-208ENST00000553989 I3L3M4 83 aa5.97□□□□□ -1.45
TDP1-208ENST00000553989 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
TDP1-208ENST00000553989 SUMO4Q6EEV6 95 aa5.97□□□□□ -1.45
TDP1-208ENST00000553989 Q6ZSN1 163 aa5.97□□□□□ -1.45
TDP1-208ENST00000553989 PRADC1Q9BSG0 188 aa5.97□□□□□ -1.45
TDP1-208ENST00000553989 SDHAF1A6NFY7 115 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 M0QY20 66 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 ZNF876PQ49A33 203 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 SPXQ9BT56 116 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 VCX2Q9H322 139 aa5.96□□□□□ -1.46
TDP1-208ENST00000553989 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
TDP1-208ENST00000553989 TRAV4A0A0B4J268 109 aa5.95□□□□□ -1.46
TDP1-208ENST00000553989 ZNF815PA8K554 130 aa5.95□□□□□ -1.46
TDP1-208ENST00000553989 PLEKHB2Q96CS7 222 aa5.95□□□□□ -1.46
TDP1-208ENST00000553989 Q9HAA7 133 aa5.95□□□□□ -1.46
TDP1-208ENST00000553989 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
TDP1-208ENST00000553989 TRBV20-1A0A075B6N2 111 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 LOC100131303A0A0U1RQF7 123 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 A8MWV9 139 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 LEPROTO15243 131 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 RPL24P83731 157 aaKnown RBP5.94□□□□□ -1.46
TDP1-208ENST00000553989 SH2D6Q7Z4S9 175 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 NTN5Q8WTR8 489 aaPredicted RBP5.94□□□□□ -1.46
TDP1-208ENST00000553989 DNAJC30Q96LL9 226 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 HERC1Q15751 4861 aa5.94□□□□□ -1.46
TDP1-208ENST00000553989 A0A087WWL8 130 aa5.93□□□□□ -1.46
TDP1-208ENST00000553989 M0R2P5 195 aa5.93□□□□□ -1.46
TDP1-208ENST00000553989 TSHBP01222 138 aa5.93□□□□□ -1.46
TDP1-208ENST00000553989 LGALS3P17931 250 aaKnown RBP5.93□□□□□ -1.46
TDP1-208ENST00000553989 ZNF56Q15929 161 aa5.93□□□□□ -1.46
TDP1-208ENST00000553989 C20orf203Q8NBC4 194 aa5.93□□□□□ -1.46
TDP1-208ENST00000553989 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
TDP1-208ENST00000553989 IGLV4-69A0A075B6H9 119 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 J3QQQ9 107 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 RHODO00212 210 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 IGHV3-33P01772 117 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms