RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
XRCC3-205ENST00000553807 K7EMI3 77 aa13.03□□□□□ -0.32
XRCC3-205ENST00000553807 COX19Q49B96 90 aa13.03□□□□□ -0.32
XRCC3-205ENST00000553807 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
XRCC3-205ENST00000553807 SPACA4Q8TDM5 124 aa13.03□□□□□ -0.32
XRCC3-205ENST00000553807 APOMO95445 188 aa13.02□□□□□ -0.33
XRCC3-205ENST00000553807 MT-ND6P03923 174 aa13.02□□□□□ -0.33
XRCC3-205ENST00000553807 SYCNQ0VAF6 134 aa13.02□□□□□ -0.33
XRCC3-205ENST00000553807 CIRBPQ14011 172 aaKnown RBP13.02□□□□□ -0.33
XRCC3-205ENST00000553807 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.33
XRCC3-205ENST00000553807 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
XRCC3-205ENST00000553807 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
XRCC3-205ENST00000553807 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
XRCC3-205ENST00000553807 Q6ZN92 141 aa13.01□□□□□ -0.33
XRCC3-205ENST00000553807 SVBPQ8N300 66 aa13.01□□□□□ -0.33
XRCC3-205ENST00000553807 TGIF2-C20orf24A0A0A6YYL0 155 aa13□□□□□ -0.33
XRCC3-205ENST00000553807 SNAPINO95295 136 aa13□□□□□ -0.33
XRCC3-205ENST00000553807 ZC2HC1BQ5TFG8 222 aa13□□□□□ -0.33
XRCC3-205ENST00000553807 C2orf88Q9BSF0 95 aa13□□□□□ -0.33
XRCC3-205ENST00000553807 ALKBH7Q9BT30 221 aaPredicted RBP13□□□□□ -0.33
XRCC3-205ENST00000553807 A0A087WYN8 130 aa12.99□□□□□ -0.33
XRCC3-205ENST00000553807 IGHV3OR16-9A0A0B4J2B5 98 aa12.99□□□□□ -0.33
XRCC3-205ENST00000553807 MAJINQ3KP22 176 aa12.99□□□□□ -0.33
XRCC3-205ENST00000553807 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
XRCC3-205ENST00000553807 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
XRCC3-205ENST00000553807 A0A096LNI7 61 aa12.98□□□□□ -0.33
XRCC3-205ENST00000553807 Q6ZRU5 148 aa12.98□□□□□ -0.33
XRCC3-205ENST00000553807 PKIGQ9Y2B9 76 aa12.98□□□□□ -0.33
XRCC3-205ENST00000553807 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-205ENST00000553807 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
XRCC3-205ENST00000553807 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 LINC00173Q6ZV60 143 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 OR10D4PQ8NGN7 298 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 VCX2Q9H322 139 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
XRCC3-205ENST00000553807 G0S2P27469 103 aa12.96□□□□□ -0.33
XRCC3-205ENST00000553807 UBE2D1P51668 147 aa12.96□□□□□ -0.33
XRCC3-205ENST00000553807 TOMM6Q96B49 74 aa12.95□□□□□ -0.34
XRCC3-205ENST00000553807 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
XRCC3-205ENST00000553807 AMELXQ99217 191 aa12.95□□□□□ -0.34
XRCC3-205ENST00000553807 NPSP0C0P6 89 aa12.94□□□□□ -0.34
XRCC3-205ENST00000553807 KRTAP10-4P60372 401 aaPredicted RBP12.94□□□□□ -0.34
XRCC3-205ENST00000553807 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
XRCC3-205ENST00000553807 PLAC8Q9NZF1 115 aa12.94□□□□□ -0.34
XRCC3-205ENST00000553807 TRAPPC1Q9Y5R8 145 aa12.94□□□□□ -0.34
XRCC3-205ENST00000553807 STPG4Q8N801 248 aa12.93□□□□□ -0.34
XRCC3-205ENST00000553807 TIMM17AQ99595 171 aa12.93□□□□□ -0.34
XRCC3-205ENST00000553807 SMCO4Q9NRQ5 59 aa12.93□□□□□ -0.34
XRCC3-205ENST00000553807 A0A087WZ39 114 aa12.92□□□□□ -0.34
XRCC3-205ENST00000553807 LOC107984640A0A0U1RRK4 108 aa12.92□□□□□ -0.34
XRCC3-205ENST00000553807 PAPPA-AS1Q5QFB9 102 aa12.92□□□□□ -0.34
XRCC3-205ENST00000553807 SCGB3A1Q96QR1 104 aa12.92□□□□□ -0.34
XRCC3-205ENST00000553807 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
XRCC3-205ENST00000553807 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
XRCC3-205ENST00000553807 A0A0J9YXV3 536 aa12.9□□□□□ -0.34
XRCC3-205ENST00000553807 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
XRCC3-205ENST00000553807 ERASQ7Z444 233 aa12.9□□□□□ -0.34
XRCC3-205ENST00000553807 NDUFA1O15239 70 aa12.89□□□□□ -0.35
XRCC3-205ENST00000553807 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
XRCC3-205ENST00000553807 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
XRCC3-205ENST00000553807 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
XRCC3-205ENST00000553807 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
XRCC3-205ENST00000553807 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
XRCC3-205ENST00000553807 C7orf33Q8WU49 177 aa12.87□□□□□ -0.35
XRCC3-205ENST00000553807 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
XRCC3-205ENST00000553807 DMBT1Q9UGM3 2413 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-205ENST00000553807 F8WDY8 70 aa12.86□□□□□ -0.35
XRCC3-205ENST00000553807 UNQ6190/PRO20217Q6UXQ8 127 aa12.86□□□□□ -0.35
XRCC3-205ENST00000553807 GEMIN7Q9H840 131 aaKnown RBP12.86□□□□□ -0.35
XRCC3-205ENST00000553807 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 HERVK_113P63121 156 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 SEC11AP67812 179 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 RNF151Q2KHN1 245 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 FAM19A3Q7Z5A8 133 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 PKHD1L1Q86WI1 4243 aa12.85□□□□□ -0.35
XRCC3-205ENST00000553807 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
XRCC3-205ENST00000553807 KIAA0087Q14695 138 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 LINC01561Q8N1V8 128 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 YPEL4Q96NS1 127 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 C6orf48Q9UBA6 75 aa12.84□□□□□ -0.35
XRCC3-205ENST00000553807 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
XRCC3-205ENST00000553807 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-205ENST00000553807 TOMM7Q9P0U1 55 aa12.83□□□□□ -0.36
XRCC3-205ENST00000553807 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
XRCC3-205ENST00000553807 PRSS2P07478 247 aa12.82□□□□□ -0.36
XRCC3-205ENST00000553807 LINC00469Q8N7U9 141 aa12.82□□□□□ -0.36
XRCC3-205ENST00000553807 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
XRCC3-205ENST00000553807 J3QL48 77 aa12.81□□□□□ -0.36
XRCC3-205ENST00000553807 LINC00614P0C842 121 aa12.81□□□□□ -0.36
XRCC3-205ENST00000553807 CST9LQ9H4G1 147 aa12.81□□□□□ -0.36
XRCC3-205ENST00000553807 HERC1Q15751 4861 aa12.8□□□□□ -0.36
XRCC3-205ENST00000553807 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
XRCC3-205ENST00000553807 A0A096LNJ9 63 aa12.79□□□□□ -0.36
XRCC3-205ENST00000553807 HBDP02042 147 aa12.79□□□□□ -0.36
XRCC3-205ENST00000553807 PMVKQ15126 192 aa12.79□□□□□ -0.36
XRCC3-205ENST00000553807 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
XRCC3-205ENST00000553807 A0A1W2PNN7 141 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms