RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
LINC00517-201ENST00000553396 KIAA1644Q3SXP7 199 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 C5orf38Q86SI9 138 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 Q8N8P6 123 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 PRSS3P2Q8NHM4 247 aa6.51□□□□□ -1.37
LINC00517-201ENST00000553396 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 S100PP25815 95 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
LINC00517-201ENST00000553396 CIRBPQ14011 172 aaKnown RBP6.5□□□□□ -1.37
LINC00517-201ENST00000553396 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 CARD19Q96LW7 228 aa6.5□□□□□ -1.37
LINC00517-201ENST00000553396 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 A0A087WYN8 130 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-201ENST00000553396 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
LINC00517-201ENST00000553396 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 MAJINQ3KP22 176 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
LINC00517-201ENST00000553396 CARHSP1Q9Y2V2 147 aaKnown RBP6.49□□□□□ -1.37
LINC00517-201ENST00000553396 A0A096LNI7 61 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 C10orf91Q5T1B1 145 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 TMEM141Q96I45 108 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 RPS10P5Q9NQ39 176 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 CYSLTR1Q9Y271 337 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
LINC00517-201ENST00000553396 IGHV3OR16-9A0A0B4J2B5 98 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 APOMO95445 188 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 SPAG11BQ08648 103 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 RHEBQ15382 184 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 Q6ZRU5 148 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 CAMK2N2Q96S95 79 aa6.47□□□□□ -1.37
LINC00517-201ENST00000553396 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
LINC00517-201ENST00000553396 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.38
LINC00517-201ENST00000553396 STPG4Q8N801 248 aa6.46□□□□□ -1.38
LINC00517-201ENST00000553396 GNB1LQ9BYB4 327 aa6.46□□□□□ -1.38
LINC00517-201ENST00000553396 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
LINC00517-201ENST00000553396 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 K7EMI3 77 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 APOC3P02656 99 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 Q6ZN92 141 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 PKIGQ9Y2B9 76 aa6.45□□□□□ -1.38
LINC00517-201ENST00000553396 A0A0J9YXV3 536 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 UBE2D1P51668 147 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
LINC00517-201ENST00000553396 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 ALKBH7Q9BT30 221 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-201ENST00000553396 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 MRPL18Q9H0U6 180 aaKnown RBP6.44□□□□□ -1.38
LINC00517-201ENST00000553396 VCX2Q9H322 139 aa6.44□□□□□ -1.38
LINC00517-201ENST00000553396 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 MT-ND6P03923 174 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
LINC00517-201ENST00000553396 NDUFA5Q16718 116 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 COX19Q49B96 90 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 AMELXQ99217 191 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
LINC00517-201ENST00000553396 HERC1Q15751 4861 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 A0A087WZ39 114 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-201ENST00000553396 NDUFA1O15239 70 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 SNAPINO95295 136 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
LINC00517-201ENST00000553396 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
LINC00517-201ENST00000553396 NPSP0C0P6 89 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 G0S2P27469 103 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 SVBPQ8N300 66 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 SCGB3A1Q96QR1 104 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 TIMM17AQ99595 171 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 SMCO4Q9NRQ5 59 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 TRAPPC1Q9Y5R8 145 aa6.41□□□□□ -1.38
LINC00517-201ENST00000553396 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
LINC00517-201ENST00000553396 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
LINC00517-201ENST00000553396 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
LINC00517-201ENST00000553396 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
LINC00517-201ENST00000553396 LINC01546A6NGU7 62 aa6.39□□□□□ -1.39
LINC00517-201ENST00000553396 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
LINC00517-201ENST00000553396 KIAA0087Q14695 138 aa6.39□□□□□ -1.39
LINC00517-201ENST00000553396 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
LINC00517-201ENST00000553396 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms