RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 BGLAPP02818 100 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATXN3-218ENST00000553309 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-218ENST00000553309 DAD1P61803 113 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 RPL18Q07020 188 aaKnown RBP3.32□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF816Q0VGE8 651 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-218ENST00000553309 PVRIGQ6DKI7 326 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 CEMP1Q6PRD7 247 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-218ENST00000553309 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 FAM216BQ8N7L0 139 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 IFI27L1Q96BM0 104 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 Q96M85 177 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 PAXXQ9BUH6 204 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 R4GMQ9 66 aa3.32□□□□□ -1.88
ATXN3-218ENST00000553309 IGLV1-36A0A0B4J1U3 117 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 NDUFB3O43676 98 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF823P16415 610 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF32P17041 273 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 PCBD1P61457 104 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 ABCA11PQ4W5N1 156 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 SCGB1D4Q6XE38 83 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-218ENST00000553309 CCL13Q99616 98 aa3.31□□□□□ -1.88
ATXN3-218ENST00000553309 TRBV7-3A0A075B6L6 115 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 C19orf71A6NCJ1 209 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 INS-IGF2F8WCM5 200 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 H0Y9J4 135 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 H3BMM0 161 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 FSTL3O95633 263 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 TFF1P04155 84 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 LGALS3P17931 250 aaKnown RBP3.3□□□□□ -1.88
ATXN3-218ENST00000553309 CD24P25063 80 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 WDR86Q86TI4 376 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 LYPD6Q86Y78 171 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 CALYQ9NYX4 217 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 DNAH5Q8TE73 4624 aa3.3□□□□□ -1.88
ATXN3-218ENST00000553309 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 C12orf77C9JDV5 145 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 H3BVH4 76 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 BCE1O60756 84 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 HBDP02042 147 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 SNRPD3P62318 126 aaKnown RBP3.29□□□□□ -1.88
ATXN3-218ENST00000553309 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 SDIM1Q6ZPB5 146 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF826PQ6ZT77 177 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 LYZL2Q7Z4W2 148 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 MKXQ8IYA7 352 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
ATXN3-218ENST00000553309 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 A0A1B0GXF2 115 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 M0R1W7 72 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 M0R2N4 97 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 UBE2L6O14933 153 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 PRB4P10163 310 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-218ENST00000553309 UBE2D1P51668 147 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 LAGE3Q14657 143 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 CENPWQ5EE01 88 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 TTTY10Q9BZA0 68 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 TAS2R4Q9NYW5 299 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 ZNF492Q9P255 531 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
ATXN3-218ENST00000553309 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 TMSB15BA0A087X1C1 80 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 LINC01549A6NIU2 74 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 J3QT63 122 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 PEX7O00628 323 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 HBBP68871 147 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 ATXN8Q156A1 80 aa3.27□□□□□ -1.89
ATXN3-218ENST00000553309 C11orf68Q9H3H3 251 aaKnown RBP3.27□□□□□ -1.89
ATXN3-218ENST00000553309 IGKV1D-43A0A0B4J1Z2 117 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 TRAV41A0A0B4J266 112 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 NDUFC1O43677 76 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 TIMM17BO60830 172 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 IGLV3-1P01715 115 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 CCKP06307 115 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 MFAP2P55001 183 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 CXCL6P80162 114 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 MIC13Q5XKP0 118 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 UNQ9165/PRO28630Q6UXU0 137 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 LINC00596Q86U02 117 aa3.26□□□□□ -1.89
ATXN3-218ENST00000553309 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms