RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 A0A096LNI7 61 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-227ENST00000553256 RHEBQ15382 184 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 C2orf66Q6UXQ4 117 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 AMELXQ99217 191 aa12.17□□□□□ -0.46
PTCH1-227ENST00000553256 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
PTCH1-227ENST00000553256 SYCNQ0VAF6 134 aa12.16□□□□□ -0.46
PTCH1-227ENST00000553256 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
PTCH1-227ENST00000553256 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
PTCH1-227ENST00000553256 CARD19Q96LW7 228 aa12.16□□□□□ -0.46
PTCH1-227ENST00000553256 NXT2Q9NPJ8 142 aaKnown RBP12.16□□□□□ -0.46
PTCH1-227ENST00000553256 NPSP0C0P6 89 aa12.15□□□□□ -0.46
PTCH1-227ENST00000553256 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
PTCH1-227ENST00000553256 Q6ZRU5 148 aa12.15□□□□□ -0.46
PTCH1-227ENST00000553256 TMEM141Q96I45 108 aa12.15□□□□□ -0.46
PTCH1-227ENST00000553256 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-227ENST00000553256 CYSLTR1Q9Y271 337 aa12.15□□□□□ -0.46
PTCH1-227ENST00000553256 IFITM10A6NMD0 228 aa12.14□□□□□ -0.47
PTCH1-227ENST00000553256 ZNF561-AS1K7EIQ3 104 aa12.14□□□□□ -0.47
PTCH1-227ENST00000553256 UBE2D1P51668 147 aa12.14□□□□□ -0.47
PTCH1-227ENST00000553256 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
PTCH1-227ENST00000553256 MALP21145 153 aa12.13□□□□□ -0.47
PTCH1-227ENST00000553256 ZC2HC1BQ5TFG8 222 aa12.13□□□□□ -0.47
PTCH1-227ENST00000553256 A0A087WZ39 114 aa12.12□□□□□ -0.47
PTCH1-227ENST00000553256 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-227ENST00000553256 S100PP25815 95 aa12.12□□□□□ -0.47
PTCH1-227ENST00000553256 RPL37AP61513 92 aaKnown RBP12.12□□□□□ -0.47
PTCH1-227ENST00000553256 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
PTCH1-227ENST00000553256 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
PTCH1-227ENST00000553256 RPS10P5Q9NQ39 176 aa12.12□□□□□ -0.47
PTCH1-227ENST00000553256 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
PTCH1-227ENST00000553256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-227ENST00000553256 APOMO95445 188 aa12.1□□□□□ -0.47
PTCH1-227ENST00000553256 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
PTCH1-227ENST00000553256 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
PTCH1-227ENST00000553256 COX19Q49B96 90 aa12.1□□□□□ -0.47
PTCH1-227ENST00000553256 TOMM6Q96B49 74 aa12.1□□□□□ -0.47
PTCH1-227ENST00000553256 MT-ND6P03923 174 aa12.09□□□□□ -0.47
PTCH1-227ENST00000553256 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
PTCH1-227ENST00000553256 TEX43Q6ZNM6 134 aa12.09□□□□□ -0.47
PTCH1-227ENST00000553256 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
PTCH1-227ENST00000553256 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
PTCH1-227ENST00000553256 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 C10orf25Q5T742 122 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 LINC01561Q8N1V8 128 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 STPG4Q8N801 248 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 CAMK2N2Q96S95 79 aa12.08□□□□□ -0.48
PTCH1-227ENST00000553256 MRPL18Q9H0U6 180 aaKnown RBP12.08□□□□□ -0.48
PTCH1-227ENST00000553256 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
PTCH1-227ENST00000553256 F8WDY8 70 aa12.07□□□□□ -0.48
PTCH1-227ENST00000553256 MRPL35Q9NZE8 188 aaKnown RBP12.07□□□□□ -0.48
PTCH1-227ENST00000553256 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
PTCH1-227ENST00000553256 TNXBP22105 4242 aa12.07□□□□□ -0.48
PTCH1-227ENST00000553256 APOC3P02656 99 aa12.06□□□□□ -0.48
PTCH1-227ENST00000553256 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
PTCH1-227ENST00000553256 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
PTCH1-227ENST00000553256 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
PTCH1-227ENST00000553256 VCX2Q9H322 139 aa12.05□□□□□ -0.48
PTCH1-227ENST00000553256 PKIGQ9Y2B9 76 aa12.05□□□□□ -0.48
PTCH1-227ENST00000553256 A0A0J9YXV3 536 aa12.04□□□□□ -0.48
PTCH1-227ENST00000553256 ERASQ7Z444 233 aa12.04□□□□□ -0.48
PTCH1-227ENST00000553256 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
PTCH1-227ENST00000553256 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
PTCH1-227ENST00000553256 A0A096LNJ9 63 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 TLX1NBP0CAT3 122 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 SVBPQ8N300 66 aa12.03□□□□□ -0.48
PTCH1-227ENST00000553256 SNAPINO95295 136 aa12.02□□□□□ -0.49
PTCH1-227ENST00000553256 G0S2P27469 103 aa12.02□□□□□ -0.49
PTCH1-227ENST00000553256 Q6ZN92 141 aa12.02□□□□□ -0.49
PTCH1-227ENST00000553256 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
PTCH1-227ENST00000553256 NDUFA1O15239 70 aa12□□□□□ -0.49
PTCH1-227ENST00000553256 OXTP01178 125 aa12□□□□□ -0.49
PTCH1-227ENST00000553256 GAGE2BQ13066 116 aa12□□□□□ -0.49
PTCH1-227ENST00000553256 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
PTCH1-227ENST00000553256 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
PTCH1-227ENST00000553256 Q6ZRP5 223 aa11.99□□□□□ -0.49
PTCH1-227ENST00000553256 CDKN2A-AS1Q9UH64 79 aa11.99□□□□□ -0.49
PTCH1-227ENST00000553256 IGLV5-45A0A087WSX0 123 aa11.98□□□□□ -0.49
PTCH1-227ENST00000553256 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
PTCH1-227ENST00000553256 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
PTCH1-227ENST00000553256 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
PTCH1-227ENST00000553256 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
PTCH1-227ENST00000553256 HERVK_113P63121 156 aa11.97□□□□□ -0.49
PTCH1-227ENST00000553256 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
PTCH1-227ENST00000553256 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
PTCH1-227ENST00000553256 C7orf33Q8WU49 177 aa11.97□□□□□ -0.49
PTCH1-227ENST00000553256 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
PTCH1-227ENST00000553256 C9orf116Q5BN46 136 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-227ENST00000553256 CST9LQ9H4G1 147 aa11.96□□□□□ -0.49
PTCH1-227ENST00000553256 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
PTCH1-227ENST00000553256 MT1HL1P0DM35 61 aa11.95□□□□□ -0.5
PTCH1-227ENST00000553256 SEC11AP67812 179 aa11.95□□□□□ -0.5
PTCH1-227ENST00000553256 FA2HQ7L5A8 372 aa11.95□□□□□ -0.5
PTCH1-227ENST00000553256 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms