RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 I3L3M4 83 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 RAB4AP20338 218 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 TMEM191AQ9H0A3 160 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 TMEM242Q9NWH2 141 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 NAT8Q9UHE5 227 aa5.06□□□□□ -1.6
CDK4-213ENST00000552713 FAM168BA1KXE4 195 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 TSPAN13O95857 204 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 TSHBP01222 138 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 RPL18AQ02543 176 aaKnown RBP5.05□□□□□ -1.6
CDK4-213ENST00000552713 RIGQ13278 110 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
CDK4-213ENST00000552713 NAT8BQ9UHF3 227 aa5.05□□□□□ -1.6
CDK4-213ENST00000552713 A0A087WZ39 114 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 TRBV6-5A0A0K0K1A5 114 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 H7C423 109 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 APOMO95445 188 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 MRPL54Q6P161 138 aaKnown RBP5.04□□□□□ -1.6
CDK4-213ENST00000552713 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
CDK4-213ENST00000552713 ESDP10768 282 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 ZNF25P17030 456 aaPredicted RBP5.03□□□□□ -1.6
CDK4-213ENST00000552713 POLR2KP53803 58 aaKnown RBP5.03□□□□□ -1.6
CDK4-213ENST00000552713 MRPL51Q4U2R6 128 aaKnown RBP5.03□□□□□ -1.6
CDK4-213ENST00000552713 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 MRAP2Q96G30 205 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 TMEM101Q96IK0 257 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 BTF3L4Q96K17 158 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 CDC42SE2Q9NRR3 84 aa5.03□□□□□ -1.6
CDK4-213ENST00000552713 SMIM27A0A1W2PRY6 76 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 VCYO14598 125 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 FCER1GP30273 86 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 UBE2D1P51668 147 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 SS18Q15532 418 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
CDK4-213ENST00000552713 FAM104BQ5XKR9 115 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 NRACQ8N912 160 aa5.02□□□□□ -1.61
CDK4-213ENST00000552713 C7orf77A4D0Y5 90 aa5.01□□□□□ -1.61
CDK4-213ENST00000552713 MALP21145 153 aa5.01□□□□□ -1.61
CDK4-213ENST00000552713 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
CDK4-213ENST00000552713 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
CDK4-213ENST00000552713 TRBV27A0A0K0K1C4 114 aa5□□□□□ -1.61
CDK4-213ENST00000552713 CKS2P33552 79 aa5□□□□□ -1.61
CDK4-213ENST00000552713 RPL13AP40429 203 aaKnown RBP5□□□□□ -1.61
CDK4-213ENST00000552713 FAM19A5Q7Z5A7 132 aaPredicted RBP5□□□□□ -1.61
CDK4-213ENST00000552713 C5orf38Q86SI9 138 aa5□□□□□ -1.61
CDK4-213ENST00000552713 C2orf48Q96LS8 159 aa5□□□□□ -1.61
CDK4-213ENST00000552713 SMDT1Q9H4I9 107 aa5□□□□□ -1.61
CDK4-213ENST00000552713 TRAV13-1A0A0B4J241 112 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 D6R8Y8 96 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 COX7A2LO14548 114 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 TCAPO15273 167 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 TNFRSF6BO95407 300 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 RAB14P61106 215 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 C10orf25Q5T742 122 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 MRPL52Q86TS9 123 aaKnown RBP4.99□□□□□ -1.61
CDK4-213ENST00000552713 KIR2DL4Q99706 377 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 UBE2D4Q9Y2X8 147 aa4.99□□□□□ -1.61
CDK4-213ENST00000552713 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 A0A087X002 238 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 A0A1B0GW15 77 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 A0A1B0GXF2 115 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 PPP1R17O96001 155 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 NPYP01303 97 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 RPL39P62891 51 aaKnown RBP4.98□□□□□ -1.61
CDK4-213ENST00000552713 HBBP68871 147 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 SPAG11BQ08648 103 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 RNF151Q2KHN1 245 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 Q6ZUT4 128 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 RETNLBQ9BQ08 111 aa4.98□□□□□ -1.61
CDK4-213ENST00000552713 CARHSP1Q9Y2V2 147 aaKnown RBP4.98□□□□□ -1.61
CDK4-213ENST00000552713 LOC389332A0A1B0GUA5 103 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 LINC00862A6NCI5 91 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 C1orf196B1AJZ1 125 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 F8W036 122 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 PPP1R2P9O14990 202 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 LINC00310P59036 64 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 GAGE2EQ4V326 116 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 C20orf78Q9BR46 151 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 GAGE2DQ9UEU5 116 aa4.97□□□□□ -1.61
CDK4-213ENST00000552713 TRBV24-1A0A075B6N3 115 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 B5MCH6 92 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 M0QXV9 152 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 S100A8P05109 93 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 UBE2BP63146 152 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 TMEM136Q6ZRR5 245 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 PRELID3AQ96N28 172 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
CDK4-213ENST00000552713 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
CDK4-213ENST00000552713 MT-ND4LP03901 98 aa4.95□□□□□ -1.62
CDK4-213ENST00000552713 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
CDK4-213ENST00000552713 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
CDK4-213ENST00000552713 TMEM18Q96B42 140 aa4.95□□□□□ -1.62
CDK4-213ENST00000552713 ZNF861PO60384 105 aa4.94□□□□□ -1.62
CDK4-213ENST00000552713 PPBPP02775 128 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms