RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 OR10D4PQ8NGN7 298 aa12.74□□□□□ -0.37
SLC48A1-208ENST00000551301 IFITM10A6NMD0 228 aa12.73□□□□□ -0.37
SLC48A1-208ENST00000551301 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
SLC48A1-208ENST00000551301 FAT3Q8TDW7 4589 aa12.72□□□□□ -0.37
SLC48A1-208ENST00000551301 ANAPC16Q96DE5 110 aa12.72□□□□□ -0.37
SLC48A1-208ENST00000551301 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
SLC48A1-208ENST00000551301 F8WDY8 70 aa12.71□□□□□ -0.37
SLC48A1-208ENST00000551301 TGIF2-C20orf24A0A0A6YYL0 155 aa12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 RNF151Q2KHN1 245 aa12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 Q6ZRP5 223 aa12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 ORAOV1Q8WV07 137 aa12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 MAP1LC3AQ9H492 121 aa12.7□□□□□ -0.38
SLC48A1-208ENST00000551301 OPRPNQ99935 248 aaPredicted RBP12.69□□□□□ -0.38
SLC48A1-208ENST00000551301 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
SLC48A1-208ENST00000551301 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
SLC48A1-208ENST00000551301 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
SLC48A1-208ENST00000551301 NDUFA1O15239 70 aa12.67□□□□□ -0.38
SLC48A1-208ENST00000551301 REG3GQ6UW15 175 aa12.67□□□□□ -0.38
SLC48A1-208ENST00000551301 SPINK6Q6UWN8 80 aa12.67□□□□□ -0.38
SLC48A1-208ENST00000551301 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
SLC48A1-208ENST00000551301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
SLC48A1-208ENST00000551301 MT1HL1P0DM35 61 aa12.66□□□□□ -0.38
SLC48A1-208ENST00000551301 MRPL35Q9NZE8 188 aaKnown RBP12.66□□□□□ -0.38
SLC48A1-208ENST00000551301 Q6ZN92 141 aa12.65□□□□□ -0.38
SLC48A1-208ENST00000551301 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
SLC48A1-208ENST00000551301 C2orf88Q9BSF0 95 aa12.65□□□□□ -0.38
SLC48A1-208ENST00000551301 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
SLC48A1-208ENST00000551301 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
SLC48A1-208ENST00000551301 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
SLC48A1-208ENST00000551301 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
SLC48A1-208ENST00000551301 A0A0J9YXV3 536 aa12.63□□□□□ -0.39
SLC48A1-208ENST00000551301 ORMDL2Q53FV1 153 aa12.63□□□□□ -0.39
SLC48A1-208ENST00000551301 C9orf116Q5BN46 136 aaPredicted RBP12.63□□□□□ -0.39
SLC48A1-208ENST00000551301 Q8N8P6 123 aa12.63□□□□□ -0.39
SLC48A1-208ENST00000551301 IGLV4-3A0A075B6K6 122 aa12.62□□□□□ -0.39
SLC48A1-208ENST00000551301 K7EMI3 77 aa12.62□□□□□ -0.39
SLC48A1-208ENST00000551301 G0S2P27469 103 aa12.62□□□□□ -0.39
SLC48A1-208ENST00000551301 LINC01600Q96MT4 127 aa12.62□□□□□ -0.39
SLC48A1-208ENST00000551301 CTDSP1Q9GZU7 261 aa12.62□□□□□ -0.39
SLC48A1-208ENST00000551301 A0A087WZ39 114 aa12.61□□□□□ -0.39
SLC48A1-208ENST00000551301 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
SLC48A1-208ENST00000551301 MT-ND6P03923 174 aa12.61□□□□□ -0.39
SLC48A1-208ENST00000551301 CLLU1Q5K131 121 aa12.61□□□□□ -0.39
SLC48A1-208ENST00000551301 VCX2Q9H322 139 aa12.61□□□□□ -0.39
SLC48A1-208ENST00000551301 LINC00242Q5T6M2 205 aa12.6□□□□□ -0.39
SLC48A1-208ENST00000551301 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
SLC48A1-208ENST00000551301 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
SLC48A1-208ENST00000551301 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
SLC48A1-208ENST00000551301 NPSP0C0P6 89 aa12.58□□□□□ -0.4
SLC48A1-208ENST00000551301 UNQ6190/PRO20217Q6UXQ8 127 aa12.58□□□□□ -0.4
SLC48A1-208ENST00000551301 LINC01561Q8N1V8 128 aa12.57□□□□□ -0.4
SLC48A1-208ENST00000551301 PRSS2P07478 247 aa12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 TLX1NBP0CAT3 122 aa12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 UBE2D1P51668 147 aa12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 PACRGQ96M98 296 aaPredicted RBP12.56□□□□□ -0.4
SLC48A1-208ENST00000551301 HMCN2Q8NDA2 5059 aa12.55□□□□□ -0.4
SLC48A1-208ENST00000551301 TRBV30A0A0K0K1B3 111 aa12.55□□□□□ -0.4
SLC48A1-208ENST00000551301 C10orf25Q5T742 122 aa12.55□□□□□ -0.4
SLC48A1-208ENST00000551301 C6orf48Q9UBA6 75 aa12.55□□□□□ -0.4
SLC48A1-208ENST00000551301 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
SLC48A1-208ENST00000551301 SEC11AP67812 179 aa12.54□□□□□ -0.4
SLC48A1-208ENST00000551301 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
SLC48A1-208ENST00000551301 PHF5AQ7RTV0 110 aaKnown RBP12.54□□□□□ -0.4
SLC48A1-208ENST00000551301 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
SLC48A1-208ENST00000551301 TRAV9-1A0A075B6T8 112 aa12.53□□□□□ -0.4
SLC48A1-208ENST00000551301 IFITM2Q01629 132 aa12.53□□□□□ -0.4
SLC48A1-208ENST00000551301 C1orf137Q5JT78 98 aa12.53□□□□□ -0.4
SLC48A1-208ENST00000551301 S100PP25815 95 aa12.52□□□□□ -0.41
SLC48A1-208ENST00000551301 CKS1BP61024 79 aa12.52□□□□□ -0.41
SLC48A1-208ENST00000551301 KIAA0087Q14695 138 aa12.52□□□□□ -0.41
SLC48A1-208ENST00000551301 AMELXQ99217 191 aa12.52□□□□□ -0.41
SLC48A1-208ENST00000551301 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
SLC48A1-208ENST00000551301 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 NDUFC2-KCTD14E9PQ53 114 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 HERVK_113P63121 156 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 C6orf226Q5I0X4 101 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 C2orf82Q6UX34 121 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 TOMM7Q9P0U1 55 aa12.5□□□□□ -0.41
SLC48A1-208ENST00000551301 ZC2HC1BQ5TFG8 222 aa12.49□□□□□ -0.41
SLC48A1-208ENST00000551301 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
SLC48A1-208ENST00000551301 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
SLC48A1-208ENST00000551301 FAM168BA1KXE4 195 aa12.48□□□□□ -0.41
SLC48A1-208ENST00000551301 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
SLC48A1-208ENST00000551301 DIRC1Q969H9 104 aa12.48□□□□□ -0.41
SLC48A1-208ENST00000551301 ALKBH7Q9BT30 221 aaPredicted RBP12.48□□□□□ -0.41
SLC48A1-208ENST00000551301 KRTAP10-8P60410 259 aa12.47□□□□□ -0.41
SLC48A1-208ENST00000551301 UBE2BP63146 152 aa12.47□□□□□ -0.41
SLC48A1-208ENST00000551301 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
SLC48A1-208ENST00000551301 TOMM6Q96B49 74 aa12.47□□□□□ -0.41
SLC48A1-208ENST00000551301 M0QXV9 152 aa12.46□□□□□ -0.41
SLC48A1-208ENST00000551301 COX19Q49B96 90 aa12.46□□□□□ -0.41
SLC48A1-208ENST00000551301 FAM19A3Q7Z5A8 133 aa12.46□□□□□ -0.41
SLC48A1-208ENST00000551301 Q8IZM0 81 aa12.46□□□□□ -0.41
SLC48A1-208ENST00000551301 SCGB3A1Q96QR1 104 aa12.46□□□□□ -0.41
SLC48A1-208ENST00000551301 SEC11CQ9BY50 192 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms