RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.25	□□□□□ -1.89
RACGAP1-223	ENST00000551260	SH2D1A	O60880	128 aa		3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	AKR1C3	P42330	323 aa		3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	FP248	Q71RG6	208 aa	Predicted RBP	3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	ZFP82	Q8N141	532 aa		3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	TMEM18	Q96B42	140 aa		3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	CTDSP1	Q9GZU7	261 aa		3.24	□□□□□ -1.89
RACGAP1-223	ENST00000551260	TMSB15B	A0A087X1C1	80 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	C19orf71	A6NCJ1	209 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260		M0QXV9	152 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	UBE2L6	O14933	153 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	CCL25	O15444	150 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	PRSS2	P07478	247 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	RPL35	P42766	123 aa	Known RBP	3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	PCOTH	Q58A44	107 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260		Q86TA4	180 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	OR5A1	Q8NGJ0	315 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	CAMK2N2	Q96S95	79 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	MED9	Q9NWA0	146 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	MUC12	Q9UKN1	5478 aa		3.23	□□□□□ -1.89
RACGAP1-223	ENST00000551260	MUC21	A0A140T8X8	626 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	IGLC6	P0CF74	106 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	CFC1	P0CG37	223 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	GNG4	P50150	75 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	FAM74A3	Q4VXF1	159 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	LINC00242	Q5T6M2	205 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	TEX261	Q6UWH6	196 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	COX6B2	Q6YFQ2	88 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	FAM231D	Q6ZW35	169 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	OCC1	Q8TAD7	63 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	ISOC2	Q96AB3	205 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	CNFN	Q9BYD5	112 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260	GNG13	Q9P2W3	67 aa		3.22	□□□□□ -1.89
RACGAP1-223	ENST00000551260		A8MWL6	223 aa		3.21	□□□□□ -1.9
RACGAP1-223	ENST00000551260	KRTAP10-7	P60409	375 aa	Predicted RBP	3.21	□□□□□ -1.9
RACGAP1-223	ENST00000551260	SST	P61278	116 aa		3.21	□□□□□ -1.9
RACGAP1-223	ENST00000551260	SPANXN1	Q5VSR9	72 aa		3.21	□□□□□ -1.9
RACGAP1-223	ENST00000551260	LINC00959	A0A1B0GUT2	108 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RAB19	A4D1S5	217 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TRGC1	P0CF51	173 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	SMIM17	P0DL12	118 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	NTF3	P20783	257 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	NKX2-5	P52952	324 aa	Predicted RBP	3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	PEA15	Q15121	130 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TMEM241	Q24JQ0	296 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	GAGE2E	Q4V326	116 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	C3orf22	Q8N5N4	141 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	OR2D3	Q8NGH3	330 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	OR10AG1	Q8NH19	301 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	OSTC	Q9NRP0	149 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	GAGE2D	Q9UEU5	116 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	UBE2D4	Q9Y2X8	147 aa		3.2	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TRBV20OR9-2	A0A075B6H5	130 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	IGKV2D-26	A0A0A0MRZ7	120 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260		H7C423	109 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260		M0QY20	66 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	PPP1R17	O96001	155 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	KRTAP19-6	Q3LI70	58 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	CENPW	Q5EE01	88 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RNASEK	Q6P5S7	137 aa	Known RBP	3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	ALKAL2	Q6UX46	152 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	SMIM15	Q7Z3B0	74 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	EIF5A2	Q9GZV4	153 aa	Known RBP	3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	NIT2	Q9NQR4	276 aa		3.19	□□□□□ -1.9
RACGAP1-223	ENST00000551260	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260		A0A1B0GVG6	124 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	GATC	O43716	136 aa	Known RBP	3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	SRP19	P09132	144 aa	Known RBP	3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	MT3	P25713	68 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	FAM229B	Q4G0N7	80 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	AMMECR1L	Q6DCA0	310 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	LYZL1	Q6UWQ5	148 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	DAND5	Q8N907	189 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	PGLYRP4	Q96LB8	373 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	AP1S3	Q96PC3	154 aa		3.18	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TRBV6-5	A0A0K0K1A5	114 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260		A0A1B0GV50	99 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260		A0A1B0GW15	77 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	LINC00862	A6NCI5	91 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	ZNF727	A8MUV8	499 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260		K7EN84	100 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	NCR2	O95944	276 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	MGP	P08493	103 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	ESD	P10768	282 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	CTRL	P40313	264 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RPL28	P46779	137 aa	Known RBP	3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	CTAG1A	P78358	180 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RASL11A	Q6T310	242 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	CD164L2	Q6UWJ8	174 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	LINC01551	Q86U37	167 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TMEM191A	Q9H0A3	160 aa		3.17	□□□□□ -1.9
RACGAP1-223	ENST00000551260		A0A1B0GUT8	65 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	TCAP	O15273	167 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	NUPR1	O60356	82 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RAB14	P61106	215 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	RIG	Q13278	110 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	COTL1	Q14019	142 aa		3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	C9orf129	Q5T035	196 aa	Known RBP	3.16	□□□□□ -1.9
RACGAP1-223	ENST00000551260	C2orf48	Q96LS8	159 aa		3.16	□□□□□ -1.9

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