RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 RNASE7Q9H1E1 156 aaKnown RBP6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 NDUFA1O15239 70 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 ARPC5O15511 151 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 CCL20P78556 96 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 TMEM241Q24JQ0 296 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 SMIM12Q96EX1 92 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 GNG13Q9P2W3 67 aa6.32□□□□□ -1.4
TRAFD1-206ENST00000549358 C7orf77A4D0Y5 90 aa6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 UMAD1C9J7I0 102 aa6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 UNQ6190/PRO20217Q6UXQ8 127 aa6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
TRAFD1-206ENST00000549358 TRBV20OR9-2A0A075B6H5 130 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 SMDT1Q9H4I9 107 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 MANBALQ9NQG1 85 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 BIN3Q9NQY0 253 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
TRAFD1-206ENST00000549358 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 TRBV27A0A0K0K1C4 114 aa6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 F8WDY8 70 aa6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 CRYGAP11844 174 aa6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 POLR2KP53803 58 aaKnown RBP6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 CSDC2Q9Y534 153 aaKnown RBP6.29□□□□□ -1.4
TRAFD1-206ENST00000549358 FCER1GP30273 86 aa6.28□□□□□ -1.4
TRAFD1-206ENST00000549358 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
TRAFD1-206ENST00000549358 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
TRAFD1-206ENST00000549358 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
TRAFD1-206ENST00000549358 Q6ZUT4 128 aa6.27□□□□□ -1.41
TRAFD1-206ENST00000549358 CTDSP1Q9GZU7 261 aa6.27□□□□□ -1.41
TRAFD1-206ENST00000549358 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
TRAFD1-206ENST00000549358 IGHV3OR16-9A0A0B4J2B5 98 aa6.26□□□□□ -1.41
TRAFD1-206ENST00000549358 VCYO14598 125 aa6.26□□□□□ -1.41
TRAFD1-206ENST00000549358 PDE6DO43924 150 aa6.26□□□□□ -1.41
TRAFD1-206ENST00000549358 PCP4P48539 62 aa6.26□□□□□ -1.41
TRAFD1-206ENST00000549358 LINC00173Q6ZV60 143 aa6.26□□□□□ -1.41
TRAFD1-206ENST00000549358 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
TRAFD1-206ENST00000549358 NUPR1O60356 82 aa6.25□□□□□ -1.41
TRAFD1-206ENST00000549358 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
TRAFD1-206ENST00000549358 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 K7EN84 100 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 RAB4AP20338 218 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 RPL28P46779 137 aaKnown RBP6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 KRTAP13-2Q52LG2 175 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 OCC1Q8TAD7 63 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
TRAFD1-206ENST00000549358 SMKR1H3BMG3 65 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 SMLR1H3BR10 107 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 LINC00310P59036 64 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 TIMM21Q9BVV7 248 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 PPDPFQ9H3Y8 114 aa6.23□□□□□ -1.41
TRAFD1-206ENST00000549358 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 LBHQ53QV2 105 aaPredicted RBP6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 BORCS7Q96B45 105 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 KIR2DL4Q99706 377 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
TRAFD1-206ENST00000549358 A8MWL6 223 aa6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 GATCO43716 136 aaKnown RBP6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 BCE1O60756 84 aa6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 ZNF345Q14585 488 aa6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 LINC00469Q8N7U9 141 aa6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 FAM104AQ969W3 186 aa6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 PACRGQ96M98 296 aaPredicted RBP6.21□□□□□ -1.42
TRAFD1-206ENST00000549358 KANTRA0A1W2PQU2 76 aa6.2□□□□□ -1.42
TRAFD1-206ENST00000549358 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
TRAFD1-206ENST00000549358 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
TRAFD1-206ENST00000549358 A0A1B0GUT8 65 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 ZNF727A8MUV8 499 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 TRIAP1O43715 76 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 NRACQ8N912 160 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
TRAFD1-206ENST00000549358 TGIF2-C20orf24A0A0A6YYL0 155 aa6.18□□□□□ -1.42
TRAFD1-206ENST00000549358 PPP1R17O96001 155 aa6.18□□□□□ -1.42
TRAFD1-206ENST00000549358 HBBP68871 147 aa6.18□□□□□ -1.42
TRAFD1-206ENST00000549358 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
TRAFD1-206ENST00000549358 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
TRAFD1-206ENST00000549358 IGKV2D-26A0A0A0MRZ7 120 aa6.17□□□□□ -1.42
TRAFD1-206ENST00000549358 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
TRAFD1-206ENST00000549358 HIGD1CA8MV81 97 aa6.17□□□□□ -1.42
TRAFD1-206ENST00000549358 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
TRAFD1-206ENST00000549358 FAM231DQ6ZW35 169 aa6.17□□□□□ -1.42
TRAFD1-206ENST00000549358 PPP1R2P9O14990 202 aa6.16□□□□□ -1.42
TRAFD1-206ENST00000549358 MRPS36P82909 103 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms