RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 Q6ZRU5 148 aa9.27□□□□□ -0.93
LINC00661-203ENST00000549131 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
LINC00661-203ENST00000549131 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
LINC00661-203ENST00000549131 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
LINC00661-203ENST00000549131 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
LINC00661-203ENST00000549131 OR10D4PQ8NGN7 298 aa9.25□□□□□ -0.93
LINC00661-203ENST00000549131 ORAOV1Q8WV07 137 aa9.25□□□□□ -0.93
LINC00661-203ENST00000549131 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
LINC00661-203ENST00000549131 UQCC3Q6UW78 93 aa9.24□□□□□ -0.93
LINC00661-203ENST00000549131 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
LINC00661-203ENST00000549131 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 TGIF2-C20orf24A0A0A6YYL0 155 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 IFITM2Q01629 132 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
LINC00661-203ENST00000549131 Q8N8P6 123 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 TMEM141Q96I45 108 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 CTDSP1Q9GZU7 261 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 CYSLTR1Q9Y271 337 aa9.23□□□□□ -0.93
LINC00661-203ENST00000549131 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 TMEM218A2RU14 115 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 PRR3P79522 188 aaKnown RBP9.22□□□□□ -0.93
LINC00661-203ENST00000549131 TEX43Q6ZNM6 134 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 IMMP2LQ96T52 175 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
LINC00661-203ENST00000549131 ORMDL2Q53FV1 153 aa9.21□□□□□ -0.94
LINC00661-203ENST00000549131 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
LINC00661-203ENST00000549131 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
LINC00661-203ENST00000549131 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.2□□□□□ -0.94
LINC00661-203ENST00000549131 Q6ZN92 141 aa9.2□□□□□ -0.94
LINC00661-203ENST00000549131 COMMD7Q86VX2 200 aa9.2□□□□□ -0.94
LINC00661-203ENST00000549131 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
LINC00661-203ENST00000549131 NDUFA1O15239 70 aa9.19□□□□□ -0.94
LINC00661-203ENST00000549131 LINC00242Q5T6M2 205 aa9.19□□□□□ -0.94
LINC00661-203ENST00000549131 SEC11CQ9BY50 192 aa9.19□□□□□ -0.94
LINC00661-203ENST00000549131 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
LINC00661-203ENST00000549131 TRAV9-1A0A075B6T8 112 aa9.18□□□□□ -0.94
LINC00661-203ENST00000549131 K7EMI3 77 aa9.18□□□□□ -0.94
LINC00661-203ENST00000549131 S100PP25815 95 aa9.18□□□□□ -0.94
LINC00661-203ENST00000549131 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
LINC00661-203ENST00000549131 A0A087WZ39 114 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 F8WDY8 70 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 UBE2D1P51668 147 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 KIAA1644Q3SXP7 199 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
LINC00661-203ENST00000549131 VCX2Q9H322 139 aa9.16□□□□□ -0.94
LINC00661-203ENST00000549131 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
LINC00661-203ENST00000549131 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
LINC00661-203ENST00000549131 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
LINC00661-203ENST00000549131 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
LINC00661-203ENST00000549131 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
LINC00661-203ENST00000549131 NPSP0C0P6 89 aa9.14□□□□□ -0.95
LINC00661-203ENST00000549131 Q6ZRP5 223 aa9.14□□□□□ -0.95
LINC00661-203ENST00000549131 AMELXQ99217 191 aa9.14□□□□□ -0.95
LINC00661-203ENST00000549131 C6orf48Q9UBA6 75 aa9.14□□□□□ -0.95
LINC00661-203ENST00000549131 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
LINC00661-203ENST00000549131 G0S2P27469 103 aa9.13□□□□□ -0.95
LINC00661-203ENST00000549131 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
LINC00661-203ENST00000549131 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
LINC00661-203ENST00000549131 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
LINC00661-203ENST00000549131 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
LINC00661-203ENST00000549131 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
LINC00661-203ENST00000549131 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
LINC00661-203ENST00000549131 TIMM17AQ99595 171 aa9.12□□□□□ -0.95
LINC00661-203ENST00000549131 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
LINC00661-203ENST00000549131 PRSS2P07478 247 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 RHEBQ15382 184 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
LINC00661-203ENST00000549131 TRBV30A0A0K0K1B3 111 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 FAM168BA1KXE4 195 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 MT-ND6P03923 174 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 HERVK_113P63121 156 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 COX19Q49B96 90 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
LINC00661-203ENST00000549131 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
LINC00661-203ENST00000549131 SEC11AP67812 179 aa9.09□□□□□ -0.95
LINC00661-203ENST00000549131 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
LINC00661-203ENST00000549131 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
LINC00661-203ENST00000549131 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
LINC00661-203ENST00000549131 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
LINC00661-203ENST00000549131 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
LINC00661-203ENST00000549131 CKS1BP61024 79 aa9.08□□□□□ -0.96
LINC00661-203ENST00000549131 FABP9Q0Z7S8 132 aa9.08□□□□□ -0.96
LINC00661-203ENST00000549131 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
LINC00661-203ENST00000549131 ERASQ7Z444 233 aa9.08□□□□□ -0.96
LINC00661-203ENST00000549131 SMCO4Q9NRQ5 59 aa9.08□□□□□ -0.96
LINC00661-203ENST00000549131 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms