RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 A0A087WYN8 130 aa10.04□□□□□ -0.8
DDX54-205ENST00000548786 APOC3P02656 99 aa10.04□□□□□ -0.8
DDX54-205ENST00000548786 SYCNQ0VAF6 134 aa10.04□□□□□ -0.8
DDX54-205ENST00000548786 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
DDX54-205ENST00000548786 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
DDX54-205ENST00000548786 A0A096LNI7 61 aa10.03□□□□□ -0.8
DDX54-205ENST00000548786 RPL37AP61513 92 aaKnown RBP10.03□□□□□ -0.8
DDX54-205ENST00000548786 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
DDX54-205ENST00000548786 CIRBPQ14011 172 aaKnown RBP10.03□□□□□ -0.8
DDX54-205ENST00000548786 TMEM141Q96I45 108 aa10.03□□□□□ -0.8
DDX54-205ENST00000548786 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
DDX54-205ENST00000548786 PYGO1Q9Y3Y4 419 aa10.03□□□□□ -0.8
DDX54-205ENST00000548786 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
DDX54-205ENST00000548786 Q6ZRU5 148 aa10.02□□□□□ -0.81
DDX54-205ENST00000548786 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.81
DDX54-205ENST00000548786 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
DDX54-205ENST00000548786 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
DDX54-205ENST00000548786 APOMO95445 188 aa10.01□□□□□ -0.81
DDX54-205ENST00000548786 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
DDX54-205ENST00000548786 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
DDX54-205ENST00000548786 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
DDX54-205ENST00000548786 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
DDX54-205ENST00000548786 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
DDX54-205ENST00000548786 A0A0J9YXV3 536 aa10□□□□□ -0.81
DDX54-205ENST00000548786 Q6ZN92 141 aa10□□□□□ -0.81
DDX54-205ENST00000548786 SLC7A5P1Q8MH63 180 aa10□□□□□ -0.81
DDX54-205ENST00000548786 C2orf88Q9BSF0 95 aa10□□□□□ -0.81
DDX54-205ENST00000548786 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
DDX54-205ENST00000548786 NDUFA5Q16718 116 aa9.99□□□□□ -0.81
DDX54-205ENST00000548786 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
DDX54-205ENST00000548786 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
DDX54-205ENST00000548786 STPG4Q8N801 248 aa9.99□□□□□ -0.81
DDX54-205ENST00000548786 VCX2Q9H322 139 aa9.99□□□□□ -0.81
DDX54-205ENST00000548786 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 HERC1Q15751 4861 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 K7EMI3 77 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 UBE2D1P51668 147 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 GAGE2BQ13066 116 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
DDX54-205ENST00000548786 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
DDX54-205ENST00000548786 MT-ND6P03923 174 aa9.97□□□□□ -0.81
DDX54-205ENST00000548786 COX19Q49B96 90 aa9.97□□□□□ -0.81
DDX54-205ENST00000548786 SVBPQ8N300 66 aa9.97□□□□□ -0.81
DDX54-205ENST00000548786 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
DDX54-205ENST00000548786 SNAPINO95295 136 aa9.96□□□□□ -0.82
DDX54-205ENST00000548786 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
DDX54-205ENST00000548786 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.82
DDX54-205ENST00000548786 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
DDX54-205ENST00000548786 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
DDX54-205ENST00000548786 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
DDX54-205ENST00000548786 AMELXQ99217 191 aa9.96□□□□□ -0.82
DDX54-205ENST00000548786 LOC107984640A0A0U1RRK4 108 aa9.95□□□□□ -0.82
DDX54-205ENST00000548786 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
DDX54-205ENST00000548786 SMCO4Q9NRQ5 59 aa9.95□□□□□ -0.82
DDX54-205ENST00000548786 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
DDX54-205ENST00000548786 TRAPPC1Q9Y5R8 145 aa9.95□□□□□ -0.82
DDX54-205ENST00000548786 A0A087WZ39 114 aa9.94□□□□□ -0.82
DDX54-205ENST00000548786 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
DDX54-205ENST00000548786 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
DDX54-205ENST00000548786 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.93□□□□□ -0.82
DDX54-205ENST00000548786 J3QL48 77 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 NDUFA1O15239 70 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 G0S2P27469 103 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
DDX54-205ENST00000548786 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
DDX54-205ENST00000548786 ERASQ7Z444 233 aa9.92□□□□□ -0.82
DDX54-205ENST00000548786 TOMM7Q9P0U1 55 aa9.92□□□□□ -0.82
DDX54-205ENST00000548786 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
DDX54-205ENST00000548786 NPSP0C0P6 89 aa9.91□□□□□ -0.82
DDX54-205ENST00000548786 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
DDX54-205ENST00000548786 LINC01546A6NGU7 62 aa9.9□□□□□ -0.82
DDX54-205ENST00000548786 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
DDX54-205ENST00000548786 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.82
DDX54-205ENST00000548786 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
DDX54-205ENST00000548786 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
DDX54-205ENST00000548786 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.83
DDX54-205ENST00000548786 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
DDX54-205ENST00000548786 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
DDX54-205ENST00000548786 CBLN2Q8IUK8 224 aa9.89□□□□□ -0.83
DDX54-205ENST00000548786 C18orf32Q8TCD1 76 aa9.89□□□□□ -0.83
DDX54-205ENST00000548786 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
DDX54-205ENST00000548786 PRSS2P07478 247 aa9.88□□□□□ -0.83
DDX54-205ENST00000548786 HERVK_113P63121 156 aa9.88□□□□□ -0.83
DDX54-205ENST00000548786 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
DDX54-205ENST00000548786 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
DDX54-205ENST00000548786 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
DDX54-205ENST00000548786 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
DDX54-205ENST00000548786 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
DDX54-205ENST00000548786 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
DDX54-205ENST00000548786 PACRGQ96M98 296 aaPredicted RBP9.87□□□□□ -0.83
DDX54-205ENST00000548786 YPEL4Q96NS1 127 aa9.87□□□□□ -0.83
DDX54-205ENST00000548786 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
DDX54-205ENST00000548786 F8WDY8 70 aa9.86□□□□□ -0.83
DDX54-205ENST00000548786 NDUFA6P56556 154 aa9.86□□□□□ -0.83
DDX54-205ENST00000548786 SEC11AP67812 179 aa9.86□□□□□ -0.83
DDX54-205ENST00000548786 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
DDX54-205ENST00000548786 Q6ZRP5 223 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms