RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 CCL25O15444 150 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 LINC01620Q4KN68 170 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 TMEM141Q96I45 108 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 HSPB8Q9UJY1 196 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9□□□□□ -0.97
PRPF40B-207ENST00000548399 ATP5LO75964 103 aa9□□□□□ -0.97
PRPF40B-207ENST00000548399 NPSP0C0P6 89 aa9□□□□□ -0.97
PRPF40B-207ENST00000548399 FABP4P15090 132 aa9□□□□□ -0.97
PRPF40B-207ENST00000548399 XGP55808 180 aa9□□□□□ -0.97
PRPF40B-207ENST00000548399 Q6ZUT4 128 aa9□□□□□ -0.97
PRPF40B-207ENST00000548399 RYR1P21817 5038 aa8.99□□□□□ -0.97
PRPF40B-207ENST00000548399 FOXI1Q12951 378 aa8.99□□□□□ -0.97
PRPF40B-207ENST00000548399 RNASE13Q5GAN3 156 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-207ENST00000548399 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
PRPF40B-207ENST00000548399 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-207ENST00000548399 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
PRPF40B-207ENST00000548399 CD164L2Q6UWJ8 174 aa8.98□□□□□ -0.97
PRPF40B-207ENST00000548399 Q8N1X5 172 aa8.98□□□□□ -0.97
PRPF40B-207ENST00000548399 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
PRPF40B-207ENST00000548399 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 HAMPP81172 84 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 Q6ZN92 141 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 Q6ZSA8 131 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
PRPF40B-207ENST00000548399 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-207ENST00000548399 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
PRPF40B-207ENST00000548399 FAM104AQ969W3 186 aa8.96□□□□□ -0.98
PRPF40B-207ENST00000548399 MAP1LC3CQ9BXW4 147 aa8.96□□□□□ -0.98
PRPF40B-207ENST00000548399 VCX2Q9H322 139 aa8.96□□□□□ -0.98
PRPF40B-207ENST00000548399 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-207ENST00000548399 GVQW2A0A096LPI5 108 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-207ENST00000548399 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
PRPF40B-207ENST00000548399 TEX43Q6ZNM6 134 aa8.95□□□□□ -0.98
PRPF40B-207ENST00000548399 HSPG2P98160 4391 aa8.95□□□□□ -0.98
PRPF40B-207ENST00000548399 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
PRPF40B-207ENST00000548399 COX7A2LO14548 114 aa8.94□□□□□ -0.98
PRPF40B-207ENST00000548399 AMELXQ99217 191 aa8.94□□□□□ -0.98
PRPF40B-207ENST00000548399 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
PRPF40B-207ENST00000548399 MALP21145 153 aa8.93□□□□□ -0.98
PRPF40B-207ENST00000548399 PMVKQ15126 192 aa8.93□□□□□ -0.98
PRPF40B-207ENST00000548399 C2orf88Q9BSF0 95 aa8.93□□□□□ -0.98
PRPF40B-207ENST00000548399 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 SYS1-DBNDD2H3BUS1 97 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 SLPIP03973 132 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 KRTDAPP60985 99 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 ZC2HC1BQ5TFG8 222 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 OR10D4PQ8NGN7 298 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
PRPF40B-207ENST00000548399 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
PRPF40B-207ENST00000548399 H0Y8G0 127 aa8.91□□□□□ -0.98
PRPF40B-207ENST00000548399 PET117Q6UWS5 81 aa8.91□□□□□ -0.98
PRPF40B-207ENST00000548399 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
PRPF40B-207ENST00000548399 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
PRPF40B-207ENST00000548399 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
PRPF40B-207ENST00000548399 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
PRPF40B-207ENST00000548399 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
PRPF40B-207ENST00000548399 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 APOMO95445 188 aa8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 UBE2D1P51668 147 aa8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 ODF1Q14990 250 aa8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 Q5VSD8 79 aa8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-207ENST00000548399 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 C20orf202A1L168 122 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 F8VRH5 84 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 LINC00526Q96FQ7 95 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 PCLOQ9Y6V0 5065 aa8.88□□□□□ -0.99
PRPF40B-207ENST00000548399 SEC11AP67812 179 aa8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 LINC00242Q5T6M2 205 aa8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 MRPL35Q9NZE8 188 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-207ENST00000548399 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
PRPF40B-207ENST00000548399 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
PRPF40B-207ENST00000548399 LOC105371267A0A1B0GV96 52 aa8.86□□□□□ -0.99
PRPF40B-207ENST00000548399 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
PRPF40B-207ENST00000548399 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
PRPF40B-207ENST00000548399 TINCRA0A1B0GVN0 87 aa8.85□□□□□ -0.99
PRPF40B-207ENST00000548399 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
PRPF40B-207ENST00000548399 AKR1D1P51857 326 aa8.85□□□□□ -0.99
PRPF40B-207ENST00000548399 COX6A2Q02221 97 aa8.85□□□□□ -0.99
PRPF40B-207ENST00000548399 SPAG11BQ08648 103 aa8.85□□□□□ -0.99
PRPF40B-207ENST00000548399 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms