RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SPAG11BQ08648 103 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 IAH1Q2TAA2 248 aaPredicted RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 SMUG1Q53HV7 270 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 GCSAMLQ5JQS6 135 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 MIR17HGQ75NE6 70 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 SNX29P2Q8IUI4 249 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 CLVS1Q8IUQ0 354 aaPredicted RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 C8orf59Q8N0T1 100 aaPredicted RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 ZFP82Q8N141 532 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 CMTM2Q8TAZ6 248 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 GGACTQ9BVM4 153 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 TXNL4BQ9NX01 149 aaKnown RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 C6orf48Q9UBA6 75 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 C22orf24Q9Y442 160 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 PIGBOS1A0A0B4J2F0 54 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 FABP5P3A8MUU1 101 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 B4DEV8 164 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 KRBOX1C9JBD0 128 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 NDUFA1O15239 70 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 SSSCA1O60232 199 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 RAB3DO95716 219 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 IGLV6-57P01721 117 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 TCRAP04437 139 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 NTF3P20783 257 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 RPL12P30050 165 aaKnown RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 NKX2-5P52952 324 aaPredicted RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 GNG5P63218 68 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 UBE2L3P68036 154 aaKnown RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 COTL1Q14019 142 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 TMEM241Q24JQ0 296 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 SPANXN2Q5MJ10 180 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 FAM74A1Q5RGS3 127 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 AMMECR1LQ6DCA0 310 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 ZFP1Q6P2D0 407 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 RNASEKQ6P5S7 137 aaKnown RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 UQCC3Q6UW78 93 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 LYZL1Q6UWQ5 148 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 MRPL55Q7Z7F7 128 aaKnown RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 PLEKHB2Q96CS7 222 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 SMIM8Q96KF7 97 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 PACRGQ96M98 296 aaPredicted RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 SLC25A21Q9BQT8 299 aaPredicted RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 ZNF471Q9BX82 626 aaPredicted RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 OTORQ9NRC9 128 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 SCN3BQ9NY72 215 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 EXTL2Q9UBQ6 330 aa1□□□□□ -2.25
DEPDC4-204ENST00000547823 RSL24D1Q9UHA3 163 aaKnown RBP1□□□□□ -2.25
DEPDC4-204ENST00000547823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 SERTM2A0A1B0GWG4 89 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 IGKV2-29A2NJV5 120 aaPredicted RBP0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 NDUFC2-KCTD14E9PQ53 114 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 M0QY20 66 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 OR7C2O60412 319 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 CIB2O75838 187 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 MT4P47944 62 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TMBIM6P55061 237 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TAS2R30P59541 319 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 PRLHP81277 87 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 BAXQ07812 192 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 C5orf38Q86SI9 138 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TMEM229BQ8NBD8 167 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 OR10D4PQ8NGN7 298 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 OR10AG1Q8NH19 301 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 C20orf166-AS1Q96NR2 134 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 SPRR4Q96PI1 79 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 MTFP1Q9UDX5 166 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TP73-AS1Q9UF72 201 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TPRKBQ9Y3C4 175 aa0.99□□□□□ -2.25
DEPDC4-204ENST00000547823 TMSB15BA0A087X1C1 80 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 MUC21A0A140T8X8 626 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 UBE2L5PA0A1B0GUS4 154 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 SMIM31A0A1B0GVY4 71 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 C1orf196B1AJZ1 125 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 DISC1C4P0D8 188 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 SH2D1AO60880 128 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 APOA1P02647 267 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 ZNF25P17030 456 aaPredicted RBP0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 TGFBR1P36897 503 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 CRIP1P50238 77 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 UBE2G2P60604 165 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 GNGT1P63211 74 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 FLI1Q01543 452 aaPredicted RBP0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 PPP1R1AQ13522 171 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 SAPCD1Q5SSQ6 148 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 RASL11AQ6T310 242 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 TEX43Q6ZNM6 134 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 Q86TA4 180 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 CBLN2Q8IUK8 224 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 PACRGLQ8N7B6 248 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 C15orf40Q8WUR7 153 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 ORAOV1Q8WV07 137 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 AP3S1Q92572 193 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 BTF3L4Q96K17 158 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 SCGB3A2Q96PL1 93 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 PRRT1Q99946 306 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 MARVELD1Q9BSK0 173 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 GNB1LQ9BYB4 327 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 CDC42SE2Q9NRR3 84 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms