RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IGHV1-24A0A0C4DH33 117 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 IGHV1-58A0A0C4DH39 117 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 SERTM2A0A1B0GWG4 89 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 C9orf170A2RU37 121 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 M0QY20 66 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 APOMO95445 188 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 BCL2P10415 239 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 S100A11P31949 105 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 EIF5AP63241 154 aaKnown RBP1.27□□□□□ -2.21
SNHG1-224ENST00000545688 SS18Q15532 418 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 FAM229BQ4G0N7 80 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 SPANXN2Q5MJ10 180 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 FAM74A4Q5TZK3 123 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 GOLT1AQ6ZVE7 132 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 MRPL55Q7Z7F7 128 aaKnown RBP1.27□□□□□ -2.21
SNHG1-224ENST00000545688 CLVS1Q8IUQ0 354 aaPredicted RBP1.27□□□□□ -2.21
SNHG1-224ENST00000545688 DERL1Q9BUN8 251 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 NPCDR1Q9BY65 106 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 UQCC1Q9NVA1 299 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 EXTL2Q9UBQ6 330 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 SCP2D1Q9UJQ7 156 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 FLVCR2Q9UPI3 526 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 PHLDA3Q9Y5J5 127 aa1.27□□□□□ -2.21
SNHG1-224ENST00000545688 FABP5P3A8MUU1 101 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 SMKR1H3BMG3 65 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 H3BVH4 76 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 CST7O76096 145 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 TCRAP04437 139 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 ESDP10768 282 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 SULT1A1P50225 295 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 NCS1P62166 190 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 GNG5P63218 68 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 ATP6V1FQ16864 119 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 PCOTHQ58A44 107 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 PRNTQ86SH4 94 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 LINC00337Q8N6G1 96 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 CNBD2Q96M20 576 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 SLC25A21Q9BQT8 299 aaPredicted RBP1.26□□□□□ -2.21
SNHG1-224ENST00000545688 NMES1Q9C002 83 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 RABL2AQ9UBK7 228 aaPredicted RBP1.26□□□□□ -2.21
SNHG1-224ENST00000545688 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
SNHG1-224ENST00000545688 UBE2L5PA0A1B0GUS4 154 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 LINC00959A0A1B0GUT2 108 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 IGSF23A1L1A6 192 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 C19orf71A6NCJ1 209 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 G3V3Q6 166 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 NUPR1O60356 82 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 MT2AP02795 61 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 CXCL1P09341 107 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 S100A4P26447 101 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 RPL12P30050 165 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 SULT1A2P50226 295 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 TMBIM6P55061 237 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 VBP1P61758 197 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 UBE2L3P68036 154 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 SAPCD1Q5SSQ6 148 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 SPAG11AQ6PDA7 123 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 ZFP82Q8N141 532 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 C5orf17Q8NAS9 161 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 OR5A1Q8NGJ0 315 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 OR10AG1Q8NH19 301 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 AP3S1Q92572 193 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 HYLS1Q96M11 299 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 WDR61Q9GZS3 305 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 NAA50Q9GZZ1 169 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 MRPL35Q9NZE8 188 aaKnown RBP1.25□□□□□ -2.21
SNHG1-224ENST00000545688 GSKIPQ9P0R6 139 aa1.25□□□□□ -2.21
SNHG1-224ENST00000545688 GRIFINA4D1Z8 144 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 FAM25AB3EWG3 89 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 FAM25CB3EWG5 89 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 FAM25GB3EWG6 89 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 B4DEV8 164 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 M0QXV9 152 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 M0R2T5 61 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 M0R381 172 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 CCL25O15444 150 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 MT1FP04733 61 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 OR5AL1P0C617 328 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 TPT1P13693 172 aaKnown RBP1.24□□□□□ -2.21
SNHG1-224ENST00000545688 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
SNHG1-224ENST00000545688 BAXQ07812 192 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 IL18Q14116 193 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 NEDD8Q15843 81 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 IAH1Q2TAA2 248 aaPredicted RBP1.24□□□□□ -2.21
SNHG1-224ENST00000545688 KHDC3LQ587J8 217 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 FAM74A1Q5RGS3 127 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 EIF5AL1Q6IS14 154 aaKnown RBP1.24□□□□□ -2.21
SNHG1-224ENST00000545688 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.24□□□□□ -2.21
SNHG1-224ENST00000545688 ISOC2Q96AB3 205 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 SMDT1Q9H4I9 107 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 EPDR1Q9UM22 224 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 ARL2-SNX15V9GYD0 113 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
SNHG1-224ENST00000545688 A0A1B0GVG6 124 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 M0R036 132 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 BCE1O60756 84 aa1.23□□□□□ -2.21
SNHG1-224ENST00000545688 SH2D1AO60880 128 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms