RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 KIAA1644Q3SXP7 199 aa7.24□□□□□ -1.25
YBX3-216ENST00000544622 ORMDL2Q53FV1 153 aa7.24□□□□□ -1.25
YBX3-216ENST00000544622 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
YBX3-216ENST00000544622 NXT2Q9NPJ8 142 aaKnown RBP7.24□□□□□ -1.25
YBX3-216ENST00000544622 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 LINC01546A6NGU7 62 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 S100PP25815 95 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 LINC00242Q5T6M2 205 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 AMELXQ99217 191 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 ALKBH7Q9BT30 221 aaPredicted RBP7.23□□□□□ -1.25
YBX3-216ENST00000544622 PLAC8Q9NZF1 115 aa7.23□□□□□ -1.25
YBX3-216ENST00000544622 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
YBX3-216ENST00000544622 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 MALP21145 153 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 SYCNQ0VAF6 134 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 COX19Q49B96 90 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 TMEM141Q96I45 108 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 CYSLTR1Q9Y271 337 aa7.22□□□□□ -1.25
YBX3-216ENST00000544622 A0A096LNI7 61 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 APOMO95445 188 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 UBE2D1P51668 147 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 Q6ZRU5 148 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 FAM19A3Q7Z5A8 133 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 OR10D4PQ8NGN7 298 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
YBX3-216ENST00000544622 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
YBX3-216ENST00000544622 A0A087WZ39 114 aa7.2□□□□□ -1.26
YBX3-216ENST00000544622 MT-ND6P03923 174 aa7.2□□□□□ -1.26
YBX3-216ENST00000544622 TEX43Q6ZNM6 134 aa7.2□□□□□ -1.26
YBX3-216ENST00000544622 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
YBX3-216ENST00000544622 IGKV2-24A0A0C4DH68 120 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 APOC3P02656 99 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 G0S2P27469 103 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
YBX3-216ENST00000544622 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 DPH3Q96FX2 82 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 CAMK2N2Q96S95 79 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
YBX3-216ENST00000544622 VCX2Q9H322 139 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
YBX3-216ENST00000544622 TGIF2-C20orf24A0A0A6YYL0 155 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
YBX3-216ENST00000544622 F8WDY8 70 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
YBX3-216ENST00000544622 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
YBX3-216ENST00000544622 SPAG11BQ08648 103 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 MAJINQ3KP22 176 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 SVBPQ8N300 66 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 STPG4Q8N801 248 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 MRPL35Q9NZE8 188 aaKnown RBP7.18□□□□□ -1.26
YBX3-216ENST00000544622 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
YBX3-216ENST00000544622 SNAPINO95295 136 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 FABP9Q0Z7S8 132 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 Q6ZN92 141 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 ERASQ7Z444 233 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 ORAOV1Q8WV07 137 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 YPEL4Q96NS1 127 aa7.17□□□□□ -1.26
YBX3-216ENST00000544622 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
YBX3-216ENST00000544622 C10orf25Q5T742 122 aa7.16□□□□□ -1.26
YBX3-216ENST00000544622 URB1-AS1Q96HZ7 61 aa7.16□□□□□ -1.26
YBX3-216ENST00000544622 C2orf88Q9BSF0 95 aa7.16□□□□□ -1.26
YBX3-216ENST00000544622 LINC01549A6NIU2 74 aa7.15□□□□□ -1.26
YBX3-216ENST00000544622 TLX1NBP0CAT3 122 aa7.15□□□□□ -1.26
YBX3-216ENST00000544622 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
YBX3-216ENST00000544622 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
YBX3-216ENST00000544622 A0A096LNJ9 63 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 A0A0J9YXV3 536 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 NDUFA1O15239 70 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 NDUFA5Q16718 116 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 C18orf32Q8TCD1 76 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 SCGB3A1Q96QR1 104 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 C6orf48Q9UBA6 75 aa7.14□□□□□ -1.27
YBX3-216ENST00000544622 HERVK_113P63121 156 aa7.13□□□□□ -1.27
YBX3-216ENST00000544622 SEC11AP67812 179 aa7.13□□□□□ -1.27
YBX3-216ENST00000544622 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
YBX3-216ENST00000544622 CDKN2A-AS1Q9UH64 79 aa7.13□□□□□ -1.27
YBX3-216ENST00000544622 OXTP01178 125 aa7.12□□□□□ -1.27
YBX3-216ENST00000544622 LINC00614P0C842 121 aa7.12□□□□□ -1.27
YBX3-216ENST00000544622 Q6ZRP5 223 aa7.12□□□□□ -1.27
YBX3-216ENST00000544622 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
YBX3-216ENST00000544622 IGLV5-45A0A087WSX0 123 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
YBX3-216ENST00000544622 C2orf82Q6UX34 121 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 Q8IZM0 81 aa7.11□□□□□ -1.27
YBX3-216ENST00000544622 CST9LQ9H4G1 147 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms