RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 C2orf48Q96LS8 159 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 SEC11CQ9BY50 192 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
VAMP1-208ENST00000544432 IGHV3OR16-9A0A0B4J2B5 98 aa8.79□□□□□ -1
VAMP1-208ENST00000544432 OXTP01178 125 aa8.79□□□□□ -1
VAMP1-208ENST00000544432 IFI27P40305 119 aaPredicted RBP8.79□□□□□ -1
VAMP1-208ENST00000544432 MAJINQ3KP22 176 aa8.79□□□□□ -1
VAMP1-208ENST00000544432 C5orf38Q86SI9 138 aa8.79□□□□□ -1
VAMP1-208ENST00000544432 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
VAMP1-208ENST00000544432 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 A0A096LNI7 61 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 LOC389332A0A1B0GUA5 103 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 IFITM10A6NMD0 228 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 F8WDY8 70 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 OR10D4PQ8NGN7 298 aa8.78□□□□□ -1
VAMP1-208ENST00000544432 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 NPSP0C0P6 89 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 Q6ZRU5 148 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 STPG4Q8N801 248 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
VAMP1-208ENST00000544432 NXT2Q9NPJ8 142 aaKnown RBP8.77□□□□□ -1.01
VAMP1-208ENST00000544432 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
VAMP1-208ENST00000544432 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
VAMP1-208ENST00000544432 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
VAMP1-208ENST00000544432 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
VAMP1-208ENST00000544432 G0S2P27469 103 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
VAMP1-208ENST00000544432 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 C2orf66Q6UXQ4 117 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 COMMD7Q86VX2 200 aa8.75□□□□□ -1.01
VAMP1-208ENST00000544432 A0A087WZ39 114 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 TGIF2-C20orf24A0A0A6YYL0 155 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 S100PP25815 95 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 AMELXQ99217 191 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 GNB1LQ9BYB4 327 aa8.74□□□□□ -1.01
VAMP1-208ENST00000544432 COX19Q49B96 90 aa8.73□□□□□ -1.01
VAMP1-208ENST00000544432 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
VAMP1-208ENST00000544432 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
VAMP1-208ENST00000544432 ORAOV1Q8WV07 137 aa8.73□□□□□ -1.01
VAMP1-208ENST00000544432 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
VAMP1-208ENST00000544432 IGIPA6NJ69 53 aa8.72□□□□□ -1.01
VAMP1-208ENST00000544432 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.72□□□□□ -1.01
VAMP1-208ENST00000544432 UBE2D1P51668 147 aa8.72□□□□□ -1.01
VAMP1-208ENST00000544432 Q6ZN92 141 aa8.72□□□□□ -1.01
VAMP1-208ENST00000544432 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
VAMP1-208ENST00000544432 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
VAMP1-208ENST00000544432 GAGE2BQ13066 116 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 RHEBQ15382 184 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 FAM19A3Q7Z5A8 133 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 VCX2Q9H322 139 aa8.71□□□□□ -1.02
VAMP1-208ENST00000544432 NDUFA1O15239 70 aa8.7□□□□□ -1.02
VAMP1-208ENST00000544432 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
VAMP1-208ENST00000544432 LINC00173Q6ZV60 143 aa8.7□□□□□ -1.02
VAMP1-208ENST00000544432 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
VAMP1-208ENST00000544432 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
VAMP1-208ENST00000544432 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
VAMP1-208ENST00000544432 MT-ND6P03923 174 aa8.69□□□□□ -1.02
VAMP1-208ENST00000544432 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
VAMP1-208ENST00000544432 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
VAMP1-208ENST00000544432 TOMM6Q96B49 74 aa8.69□□□□□ -1.02
VAMP1-208ENST00000544432 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
VAMP1-208ENST00000544432 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 SEC11AP67812 179 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
VAMP1-208ENST00000544432 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 UNQ6190/PRO20217Q6UXQ8 127 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 ERASQ7Z444 233 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 RPS10P5Q9NQ39 176 aa8.67□□□□□ -1.02
VAMP1-208ENST00000544432 C9orf116Q5BN46 136 aaPredicted RBP8.66□□□□□ -1.02
VAMP1-208ENST00000544432 Q6ZRP5 223 aa8.66□□□□□ -1.02
VAMP1-208ENST00000544432 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
VAMP1-208ENST00000544432 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
VAMP1-208ENST00000544432 HERVK_113P63121 156 aa8.65□□□□□ -1.02
VAMP1-208ENST00000544432 FABP9Q0Z7S8 132 aa8.65□□□□□ -1.02
VAMP1-208ENST00000544432 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
VAMP1-208ENST00000544432 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
VAMP1-208ENST00000544432 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
VAMP1-208ENST00000544432 PRSS2P07478 247 aa8.62□□□□□ -1.03
VAMP1-208ENST00000544432 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
VAMP1-208ENST00000544432 SRSF9Q13242 221 aaKnown RBP eCLIP8.62□□□□□ -1.03
VAMP1-208ENST00000544432 SPINK6Q6UWN8 80 aa8.62□□□□□ -1.03
VAMP1-208ENST00000544432 FA2HQ7L5A8 372 aa8.62□□□□□ -1.03
VAMP1-208ENST00000544432 Q8IZM0 81 aa8.62□□□□□ -1.03
VAMP1-208ENST00000544432 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
VAMP1-208ENST00000544432 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
VAMP1-208ENST00000544432 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
VAMP1-208ENST00000544432 SNAPINO95295 136 aa8.61□□□□□ -1.03
VAMP1-208ENST00000544432 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
VAMP1-208ENST00000544432 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
VAMP1-208ENST00000544432 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms