RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 LOC107984640A0A0U1RRK4 108 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 IFI27P40305 119 aaPredicted RBP10.28□□□□□ -0.76
CCND1-205ENST00000542367 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 GAGE2BQ13066 116 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 LAMTOR2Q9Y2Q5 125 aa10.28□□□□□ -0.76
CCND1-205ENST00000542367 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
CCND1-205ENST00000542367 SERTAD4-AS1Q5TG53 156 aa10.27□□□□□ -0.77
CCND1-205ENST00000542367 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
CCND1-205ENST00000542367 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
CCND1-205ENST00000542367 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
CCND1-205ENST00000542367 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
CCND1-205ENST00000542367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
CCND1-205ENST00000542367 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
CCND1-205ENST00000542367 Q8N8P6 123 aa10.25□□□□□ -0.77
CCND1-205ENST00000542367 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
CCND1-205ENST00000542367 A0A1W2PNN7 141 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 ADCYAP1P18509 176 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 IFITM2Q01629 132 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
CCND1-205ENST00000542367 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 UQCC3Q6UW78 93 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 IMMP2LQ96T52 175 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 CTDSP1Q9GZU7 261 aa10.23□□□□□ -0.77
CCND1-205ENST00000542367 TGIF2-C20orf24A0A0A6YYL0 155 aa10.22□□□□□ -0.77
CCND1-205ENST00000542367 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
CCND1-205ENST00000542367 MT1HL1P0DM35 61 aa10.22□□□□□ -0.77
CCND1-205ENST00000542367 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
CCND1-205ENST00000542367 C2orf66Q6UXQ4 117 aa10.22□□□□□ -0.77
CCND1-205ENST00000542367 A0A087WZ39 114 aa10.21□□□□□ -0.77
CCND1-205ENST00000542367 F8WDY8 70 aa10.21□□□□□ -0.77
CCND1-205ENST00000542367 ORMDL2Q53FV1 153 aa10.21□□□□□ -0.77
CCND1-205ENST00000542367 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.77
CCND1-205ENST00000542367 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
CCND1-205ENST00000542367 CYSLTR1Q9Y271 337 aa10.21□□□□□ -0.77
CCND1-205ENST00000542367 NDUFA1O15239 70 aa10.2□□□□□ -0.78
CCND1-205ENST00000542367 C9orf116Q5BN46 136 aaPredicted RBP10.2□□□□□ -0.78
CCND1-205ENST00000542367 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
CCND1-205ENST00000542367 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
CCND1-205ENST00000542367 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
CCND1-205ENST00000542367 K7EMI3 77 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 UBE2D1P51668 147 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 Q6ZN92 141 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 Q6ZRP5 223 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
CCND1-205ENST00000542367 KIAA0087Q14695 138 aa10.18□□□□□ -0.78
CCND1-205ENST00000542367 AMELXQ99217 191 aa10.18□□□□□ -0.78
CCND1-205ENST00000542367 VCX2Q9H322 139 aa10.18□□□□□ -0.78
CCND1-205ENST00000542367 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
CCND1-205ENST00000542367 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
CCND1-205ENST00000542367 SEC11CQ9BY50 192 aa10.17□□□□□ -0.78
CCND1-205ENST00000542367 C6orf48Q9UBA6 75 aa10.17□□□□□ -0.78
CCND1-205ENST00000542367 TNXBP22105 4242 aa10.16□□□□□ -0.78
CCND1-205ENST00000542367 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
CCND1-205ENST00000542367 NPSP0C0P6 89 aa10.16□□□□□ -0.78
CCND1-205ENST00000542367 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
CCND1-205ENST00000542367 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
CCND1-205ENST00000542367 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
CCND1-205ENST00000542367 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCND1-205ENST00000542367 PHF5AQ7RTV0 110 aaKnown RBP10.15□□□□□ -0.78
CCND1-205ENST00000542367 HMCN2Q8NDA2 5059 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 S100PP25815 95 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 G0S2P27469 103 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 COMMD7Q86VX2 200 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 LINC01561Q8N1V8 128 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 LINC01600Q96MT4 127 aa10.14□□□□□ -0.79
CCND1-205ENST00000542367 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
CCND1-205ENST00000542367 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
CCND1-205ENST00000542367 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
CCND1-205ENST00000542367 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
CCND1-205ENST00000542367 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
CCND1-205ENST00000542367 MT-ND6P03923 174 aa10.12□□□□□ -0.79
CCND1-205ENST00000542367 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
CCND1-205ENST00000542367 TOMM6Q96B49 74 aa10.12□□□□□ -0.79
CCND1-205ENST00000542367 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
CCND1-205ENST00000542367 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
CCND1-205ENST00000542367 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
CCND1-205ENST00000542367 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
CCND1-205ENST00000542367 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
CCND1-205ENST00000542367 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
CCND1-205ENST00000542367 PRSS2P07478 247 aa10.1□□□□□ -0.79
CCND1-205ENST00000542367 ERASQ7Z444 233 aa10.1□□□□□ -0.79
CCND1-205ENST00000542367 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
CCND1-205ENST00000542367 HERVK_113P63121 156 aa10.09□□□□□ -0.79
CCND1-205ENST00000542367 SEC11AP67812 179 aa10.09□□□□□ -0.79
CCND1-205ENST00000542367 C10orf91Q5T1B1 145 aa10.09□□□□□ -0.79
CCND1-205ENST00000542367 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
CCND1-205ENST00000542367 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
CCND1-205ENST00000542367 CDKN2A-AS1Q9UH64 79 aa10.09□□□□□ -0.79
CCND1-205ENST00000542367 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
CCND1-205ENST00000542367 COX19Q49B96 90 aa10.08□□□□□ -0.8
CCND1-205ENST00000542367 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
CCND1-205ENST00000542367 C1orf137Q5JT78 98 aa10.08□□□□□ -0.8
CCND1-205ENST00000542367 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
CCND1-205ENST00000542367 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms