RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 A0A096LNI7 61 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 COX7A2LO14548 114 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 LINC00242Q5T6M2 205 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 TMEM18Q96B42 140 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 YPEL4Q96NS1 127 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 AMELXQ99217 191 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 GNB1LQ9BYB4 327 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
SPARC-208ENST00000538026 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.29□□□□□ -1.56
SPARC-208ENST00000538026 TGIF2-C20orf24A0A0A6YYL0 155 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 LINC01546A6NGU7 62 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 RAB5AP20339 215 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 UBE2D1P51668 147 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 RHEBQ15382 184 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 C2orf66Q6UXQ4 117 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 Q6ZRU5 148 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 RPS10P5Q9NQ39 176 aa5.29□□□□□ -1.56
SPARC-208ENST00000538026 A0A0J9YXV3 536 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 IFITM10A6NMD0 228 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 APOC3P02656 99 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 SYCNQ0VAF6 134 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 SMAGPQ0VAQ4 97 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 CARD19Q96LW7 228 aa5.28□□□□□ -1.56
SPARC-208ENST00000538026 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
SPARC-208ENST00000538026 A0A087WZ39 114 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 A0A096LNJ9 63 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
SPARC-208ENST00000538026 PLA2G1BP04054 148 aaKnown RBP5.27□□□□□ -1.57
SPARC-208ENST00000538026 TOMM6Q96B49 74 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 TMEM141Q96I45 108 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 NXT2Q9NPJ8 142 aaKnown RBP5.27□□□□□ -1.57
SPARC-208ENST00000538026 CYSLTR1Q9Y271 337 aa5.27□□□□□ -1.57
SPARC-208ENST00000538026 A0A1W2PNN7 141 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 K7EMI3 77 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 MALP21145 153 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 S100PP25815 95 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 FABP9Q0Z7S8 132 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 MAJINQ3KP22 176 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 ORMDL2Q53FV1 153 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 UNQ6190/PRO20217Q6UXQ8 127 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 FAM19A3Q7Z5A8 133 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 SLC7A5P1Q8MH63 180 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
SPARC-208ENST00000538026 LRP2P98164 4655 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 PTTG1IPP53801 180 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
SPARC-208ENST00000538026 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 KRTAP7-1Q8IUC3 87 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 STPG4Q8N801 248 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 ORAOV1Q8WV07 137 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 VCX2Q9H322 139 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 C6orf48Q9UBA6 75 aa5.25□□□□□ -1.57
SPARC-208ENST00000538026 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
SPARC-208ENST00000538026 NPSP0C0P6 89 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 TEX43Q6ZNM6 134 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 OR10D4PQ8NGN7 298 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 C18orf32Q8TCD1 76 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 DPH3Q96FX2 82 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 CAMK2N2Q96S95 79 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 TIMM17AQ99595 171 aa5.24□□□□□ -1.57
SPARC-208ENST00000538026 MRPL35Q9NZE8 188 aaKnown RBP5.24□□□□□ -1.57
SPARC-208ENST00000538026 SNAPINO95295 136 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 APOMO95445 188 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 MT-ND6P03923 174 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 GAGE2BQ13066 116 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 COX19Q49B96 90 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 Q6ZRP5 223 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 ERASQ7Z444 233 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 SVBPQ8N300 66 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 CDKN2A-AS1Q9UH64 79 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 TRAPPC1Q9Y5R8 145 aa5.23□□□□□ -1.57
SPARC-208ENST00000538026 LOC107984640A0A0U1RRK4 108 aa5.22□□□□□ -1.57
SPARC-208ENST00000538026 FAM168BA1KXE4 195 aa5.22□□□□□ -1.57
SPARC-208ENST00000538026 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
SPARC-208ENST00000538026 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
SPARC-208ENST00000538026 SCGB3A1Q96QR1 104 aa5.22□□□□□ -1.57
SPARC-208ENST00000538026 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
SPARC-208ENST00000538026 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 MT1HL1P0DM35 61 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 PMCHL1Q16048 86 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 C2orf88Q9BSF0 95 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 LPAP08519 4548 aa5.21□□□□□ -1.58
SPARC-208ENST00000538026 F8WDY8 70 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 NDUFA1O15239 70 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 LINC00614P0C842 121 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 PRR3P79522 188 aaKnown RBP5.2□□□□□ -1.58
SPARC-208ENST00000538026 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 Q6ZN92 141 aa5.2□□□□□ -1.58
SPARC-208ENST00000538026 FA2HQ7L5A8 372 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms