RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 Q6ZN92 141 aa11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 ERASQ7Z444 233 aa11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 TMEM141Q96I45 108 aa11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.55
TNFRSF1A-209ENST00000536717 IGLV4-3A0A075B6K6 122 aa11.65□□□□□ -0.55
TNFRSF1A-209ENST00000536717 IGIPA6NJ69 53 aa11.65□□□□□ -0.55
TNFRSF1A-209ENST00000536717 SERF1AO75920 110 aa11.65□□□□□ -0.55
TNFRSF1A-209ENST00000536717 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.55
TNFRSF1A-209ENST00000536717 USP17L23D6RBM5 183 aa11.64□□□□□ -0.55
TNFRSF1A-209ENST00000536717 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
TNFRSF1A-209ENST00000536717 A0A096LNJ9 63 aa11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 SS18Q15532 418 aa11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 FAM104AQ969W3 186 aa11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-209ENST00000536717 VCX2Q9H322 139 aa11.62□□□□□ -0.55
TNFRSF1A-209ENST00000536717 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-209ENST00000536717 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
TNFRSF1A-209ENST00000536717 IFITM10A6NMD0 228 aa11.61□□□□□ -0.55
TNFRSF1A-209ENST00000536717 CCL25O15444 150 aa11.61□□□□□ -0.55
TNFRSF1A-209ENST00000536717 C2orf88Q9BSF0 95 aa11.61□□□□□ -0.55
TNFRSF1A-209ENST00000536717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 PRSS1P07477 247 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 LINC00310P59036 64 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 CHCHD10Q8WYQ3 142 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 ATP5LO75964 103 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 NDUFA6P56556 154 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 PDZD11Q5EBL8 140 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 AMELXQ99217 191 aa11.6□□□□□ -0.55
TNFRSF1A-209ENST00000536717 MYCBP2O75592 4640 aa11.59□□□□□ -0.55
TNFRSF1A-209ENST00000536717 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
TNFRSF1A-209ENST00000536717 NUPR1O60356 82 aa11.58□□□□□ -0.56
TNFRSF1A-209ENST00000536717 XCL1P47992 114 aa11.58□□□□□ -0.56
TNFRSF1A-209ENST00000536717 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
TNFRSF1A-209ENST00000536717 INAFM2P0DMQ5 153 aa11.57□□□□□ -0.56
TNFRSF1A-209ENST00000536717 LINC00173Q6ZV60 143 aa11.57□□□□□ -0.56
TNFRSF1A-209ENST00000536717 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
TNFRSF1A-209ENST00000536717 ZC2HC1BQ5TFG8 222 aa11.56□□□□□ -0.56
TNFRSF1A-209ENST00000536717 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
TNFRSF1A-209ENST00000536717 PMVKQ15126 192 aa11.55□□□□□ -0.56
TNFRSF1A-209ENST00000536717 LEPROTL1O95214 131 aa11.55□□□□□ -0.56
TNFRSF1A-209ENST00000536717 UBE2D1P51668 147 aa11.55□□□□□ -0.56
TNFRSF1A-209ENST00000536717 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
TNFRSF1A-209ENST00000536717 CHAC1Q9BUX1 264 aa11.55□□□□□ -0.56
TNFRSF1A-209ENST00000536717 FOXI1Q12951 378 aa11.54□□□□□ -0.56
TNFRSF1A-209ENST00000536717 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
TNFRSF1A-209ENST00000536717 IFI27L1Q96BM0 104 aa11.54□□□□□ -0.56
TNFRSF1A-209ENST00000536717 CST9LQ9H4G1 147 aa11.54□□□□□ -0.56
TNFRSF1A-209ENST00000536717 SEC11AP67812 179 aa11.53□□□□□ -0.56
TNFRSF1A-209ENST00000536717 CIRBP-AS1Q8TBR5 109 aa11.53□□□□□ -0.56
TNFRSF1A-209ENST00000536717 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
TNFRSF1A-209ENST00000536717 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
TNFRSF1A-209ENST00000536717 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
TNFRSF1A-209ENST00000536717 COX7A2LO14548 114 aa11.51□□□□□ -0.57
TNFRSF1A-209ENST00000536717 FABP4P15090 132 aa11.51□□□□□ -0.57
TNFRSF1A-209ENST00000536717 HERC1Q15751 4861 aa11.51□□□□□ -0.57
TNFRSF1A-209ENST00000536717 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 SLPIP03973 132 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 MALP21145 153 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 AKR1D1P51857 326 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-209ENST00000536717 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
TNFRSF1A-209ENST00000536717 S100A2P29034 98 aa11.49□□□□□ -0.57
TNFRSF1A-209ENST00000536717 HERVK_113P63121 156 aa11.49□□□□□ -0.57
TNFRSF1A-209ENST00000536717 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
TNFRSF1A-209ENST00000536717 PACRGQ96M98 296 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-209ENST00000536717 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 PLA2G1BP04054 148 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 COX6A2Q02221 97 aa11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-209ENST00000536717 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.57
TNFRSF1A-209ENST00000536717 APOMO95445 188 aa11.46□□□□□ -0.57
TNFRSF1A-209ENST00000536717 SMIM6P0DI80 62 aa11.46□□□□□ -0.57
TNFRSF1A-209ENST00000536717 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
TNFRSF1A-209ENST00000536717 H0Y8G0 127 aa11.45□□□□□ -0.58
TNFRSF1A-209ENST00000536717 PANO1I0J062 215 aa11.45□□□□□ -0.58
TNFRSF1A-209ENST00000536717 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-209ENST00000536717 A0A087WZ39 114 aa11.45□□□□□ -0.58
TNFRSF1A-209ENST00000536717 LINC00518Q8N0U6 118 aa11.45□□□□□ -0.58
TNFRSF1A-209ENST00000536717 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
TNFRSF1A-209ENST00000536717 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-209ENST00000536717 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
TNFRSF1A-209ENST00000536717 PKHD1L1Q86WI1 4243 aa11.44□□□□□ -0.58
TNFRSF1A-209ENST00000536717 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms