RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SYCNQ0VAF6 134 aa9.02□□□□□ -0.97
UBE3B-206ENST00000536398 ZC2HC1BQ5TFG8 222 aa9.02□□□□□ -0.97
UBE3B-206ENST00000536398 Q6ZRU5 148 aa9.02□□□□□ -0.97
UBE3B-206ENST00000536398 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
UBE3B-206ENST00000536398 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
UBE3B-206ENST00000536398 IFITM10A6NMD0 228 aa9.01□□□□□ -0.97
UBE3B-206ENST00000536398 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
UBE3B-206ENST00000536398 IGHV3OR16-9A0A0B4J2B5 98 aa9□□□□□ -0.97
UBE3B-206ENST00000536398 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
UBE3B-206ENST00000536398 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
UBE3B-206ENST00000536398 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
UBE3B-206ENST00000536398 C2orf66Q6UXQ4 117 aa8.99□□□□□ -0.97
UBE3B-206ENST00000536398 STPG4Q8N801 248 aa8.99□□□□□ -0.97
UBE3B-206ENST00000536398 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 CAMK2N2Q96S95 79 aa8.98□□□□□ -0.97
UBE3B-206ENST00000536398 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
UBE3B-206ENST00000536398 J3QL48 77 aa8.97□□□□□ -0.97
UBE3B-206ENST00000536398 APOMO95445 188 aa8.97□□□□□ -0.97
UBE3B-206ENST00000536398 GAGE2BQ13066 116 aa8.97□□□□□ -0.97
UBE3B-206ENST00000536398 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
UBE3B-206ENST00000536398 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
UBE3B-206ENST00000536398 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
UBE3B-206ENST00000536398 CARHSP1Q9Y2V2 147 aaKnown RBP8.97□□□□□ -0.97
UBE3B-206ENST00000536398 IGIPA6NJ69 53 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 S100PP25815 95 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 C2orf48Q96LS8 159 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 GNB1LQ9BYB4 327 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 RPS10P5Q9NQ39 176 aa8.96□□□□□ -0.98
UBE3B-206ENST00000536398 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-206ENST00000536398 UBE2D1P51668 147 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 PTTG1IPP53801 180 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 C10orf25Q5T742 122 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 TEX43Q6ZNM6 134 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 AMELXQ99217 191 aa8.95□□□□□ -0.98
UBE3B-206ENST00000536398 ALKBH7Q9BT30 221 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-206ENST00000536398 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
UBE3B-206ENST00000536398 RHEBQ15382 184 aa8.94□□□□□ -0.98
UBE3B-206ENST00000536398 VCX2Q9H322 139 aa8.94□□□□□ -0.98
UBE3B-206ENST00000536398 A0A087WZ39 114 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 K7EMI3 77 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 UNQ6190/PRO20217Q6UXQ8 127 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
UBE3B-206ENST00000536398 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
UBE3B-206ENST00000536398 FABP9Q0Z7S8 132 aa8.92□□□□□ -0.98
UBE3B-206ENST00000536398 Q6ZN92 141 aa8.92□□□□□ -0.98
UBE3B-206ENST00000536398 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
UBE3B-206ENST00000536398 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
UBE3B-206ENST00000536398 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
UBE3B-206ENST00000536398 APOC3P02656 99 aa8.91□□□□□ -0.98
UBE3B-206ENST00000536398 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
UBE3B-206ENST00000536398 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
UBE3B-206ENST00000536398 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
UBE3B-206ENST00000536398 NDUFA1O15239 70 aa8.9□□□□□ -0.98
UBE3B-206ENST00000536398 RNF151Q2KHN1 245 aa8.9□□□□□ -0.98
UBE3B-206ENST00000536398 MRPL35Q9NZE8 188 aaKnown RBP8.9□□□□□ -0.98
UBE3B-206ENST00000536398 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 OXTP01178 125 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 NPSP0C0P6 89 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
UBE3B-206ENST00000536398 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
UBE3B-206ENST00000536398 F8WDY8 70 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 MT-ND6P03923 174 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 COX19Q49B96 90 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
UBE3B-206ENST00000536398 Q6ZRP5 223 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 ERASQ7Z444 233 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 FAM19A3Q7Z5A8 133 aa8.88□□□□□ -0.99
UBE3B-206ENST00000536398 G0S2P27469 103 aa8.87□□□□□ -0.99
UBE3B-206ENST00000536398 CDKN2A-AS1Q9UH64 79 aa8.87□□□□□ -0.99
UBE3B-206ENST00000536398 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
UBE3B-206ENST00000536398 FA2HQ7L5A8 372 aa8.86□□□□□ -0.99
UBE3B-206ENST00000536398 LINC01561Q8N1V8 128 aa8.86□□□□□ -0.99
UBE3B-206ENST00000536398 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
UBE3B-206ENST00000536398 TRAPPC1Q9Y5R8 145 aa8.86□□□□□ -0.99
UBE3B-206ENST00000536398 SNAPINO95295 136 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
UBE3B-206ENST00000536398 SVBPQ8N300 66 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
UBE3B-206ENST00000536398 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
UBE3B-206ENST00000536398 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
UBE3B-206ENST00000536398 SMCO4Q9NRQ5 59 aa8.84□□□□□ -0.99
UBE3B-206ENST00000536398 TNXBP22105 4242 aa8.83□□□□□ -1
UBE3B-206ENST00000536398 A0A096LNJ9 63 aa8.83□□□□□ -1
UBE3B-206ENST00000536398 HERVK_113P63121 156 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms