RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
KNTC1-208ENST00000535410 Q6ZUT4 128 aa7.52□□□□□ -1.21
KNTC1-208ENST00000535410 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
KNTC1-208ENST00000535410 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
KNTC1-208ENST00000535410 HERC1Q15751 4861 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 K7EMI3 77 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
KNTC1-208ENST00000535410 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
KNTC1-208ENST00000535410 UQCC3Q6UW78 93 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 C5orf38Q86SI9 138 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 OR10D4PQ8NGN7 298 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
KNTC1-208ENST00000535410 A0A096LNI7 61 aa7.5□□□□□ -1.21
KNTC1-208ENST00000535410 IFITM10A6NMD0 228 aa7.5□□□□□ -1.21
KNTC1-208ENST00000535410 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
KNTC1-208ENST00000535410 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 SPAG11BQ08648 103 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 ORMDL2Q53FV1 153 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 Q6ZN92 141 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 Q8N8P6 123 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 TMEM141Q96I45 108 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 CYSLTR1Q9Y271 337 aa7.49□□□□□ -1.21
KNTC1-208ENST00000535410 IGHV3OR16-9A0A0B4J2B5 98 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 NPSP0C0P6 89 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
KNTC1-208ENST00000535410 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
KNTC1-208ENST00000535410 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
KNTC1-208ENST00000535410 NDUFA1O15239 70 aa7.47□□□□□ -1.21
KNTC1-208ENST00000535410 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
KNTC1-208ENST00000535410 VCX2Q9H322 139 aa7.47□□□□□ -1.21
KNTC1-208ENST00000535410 S100PP25815 95 aa7.46□□□□□ -1.22
KNTC1-208ENST00000535410 Q6ZRP5 223 aa7.46□□□□□ -1.22
KNTC1-208ENST00000535410 OPRPNQ99935 248 aaPredicted RBP7.46□□□□□ -1.22
KNTC1-208ENST00000535410 MRPL35Q9NZE8 188 aaKnown RBP7.46□□□□□ -1.22
KNTC1-208ENST00000535410 A0A087WZ39 114 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 TMEM218A2RU14 115 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 A6NJY4 79 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
KNTC1-208ENST00000535410 SEC11AP67812 179 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
KNTC1-208ENST00000535410 C2orf66Q6UXQ4 117 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
KNTC1-208ENST00000535410 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
KNTC1-208ENST00000535410 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
KNTC1-208ENST00000535410 RPL18AQ02543 176 aaKnown RBP7.44□□□□□ -1.22
KNTC1-208ENST00000535410 COX19Q49B96 90 aa7.44□□□□□ -1.22
KNTC1-208ENST00000535410 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
KNTC1-208ENST00000535410 SEC11CQ9BY50 192 aa7.44□□□□□ -1.22
KNTC1-208ENST00000535410 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
KNTC1-208ENST00000535410 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
KNTC1-208ENST00000535410 REG3GQ6UW15 175 aa7.43□□□□□ -1.22
KNTC1-208ENST00000535410 SPINK6Q6UWN8 80 aa7.43□□□□□ -1.22
KNTC1-208ENST00000535410 PRSS2P07478 247 aa7.42□□□□□ -1.22
KNTC1-208ENST00000535410 TLX1NBP0CAT3 122 aa7.42□□□□□ -1.22
KNTC1-208ENST00000535410 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
KNTC1-208ENST00000535410 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
KNTC1-208ENST00000535410 UBE2D1P51668 147 aa7.41□□□□□ -1.22
KNTC1-208ENST00000535410 PACRGQ96M98 296 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-208ENST00000535410 AMELXQ99217 191 aa7.41□□□□□ -1.22
KNTC1-208ENST00000535410 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
KNTC1-208ENST00000535410 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
KNTC1-208ENST00000535410 IGIPA6NJ69 53 aa7.4□□□□□ -1.22
KNTC1-208ENST00000535410 HERVK_113P63121 156 aa7.4□□□□□ -1.22
KNTC1-208ENST00000535410 UNQ6190/PRO20217Q6UXQ8 127 aa7.4□□□□□ -1.22
KNTC1-208ENST00000535410 TIMM17AQ99595 171 aa7.4□□□□□ -1.22
KNTC1-208ENST00000535410 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
KNTC1-208ENST00000535410 A0A1W2PNN7 141 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 MT-ND6P03923 174 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 CKS1BP61024 79 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
KNTC1-208ENST00000535410 ADCYAP1P18509 176 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 IFITM2Q01629 132 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 KIAA0087Q14695 138 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 RHEBQ15382 184 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 ERASQ7Z444 233 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
KNTC1-208ENST00000535410 NDUFC2-KCTD14E9PQ53 114 aa7.37□□□□□ -1.23
KNTC1-208ENST00000535410 C10orf25Q5T742 122 aa7.37□□□□□ -1.23
KNTC1-208ENST00000535410 C6orf48Q9UBA6 75 aa7.37□□□□□ -1.23
KNTC1-208ENST00000535410 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
KNTC1-208ENST00000535410 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 FA2HQ7L5A8 372 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 Q8IZM0 81 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 ALKBH7Q9BT30 221 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-208ENST00000535410 SMCO4Q9NRQ5 59 aa7.36□□□□□ -1.23
KNTC1-208ENST00000535410 TOMM7Q9P0U1 55 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms