RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 RAB5AP20339 215 aa11.41□□□□□ -0.58
CAPRIN1-217ENST00000534825 IGHV1-58A0A0C4DH39 117 aa11.4□□□□□ -0.58
CAPRIN1-217ENST00000534825 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
CAPRIN1-217ENST00000534825 TRAPPC1Q9Y5R8 145 aa11.4□□□□□ -0.58
CAPRIN1-217ENST00000534825 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 TRAV13-1A0A0B4J241 112 aa11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 COLCA2A8K830 154 aa11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 FABP9Q0Z7S8 132 aa11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 OPRPNQ99935 248 aaPredicted RBP11.39□□□□□ -0.59
CAPRIN1-217ENST00000534825 NPSP0C0P6 89 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 COX6A2Q02221 97 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
CAPRIN1-217ENST00000534825 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-217ENST00000534825 HERC1Q15751 4861 aa11.37□□□□□ -0.59
CAPRIN1-217ENST00000534825 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
CAPRIN1-217ENST00000534825 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
CAPRIN1-217ENST00000534825 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CAPRIN1-217ENST00000534825 A0A087WYN8 130 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 COX7A2LO14548 114 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 TOMM6Q96B49 74 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 AMELXQ99217 191 aa11.35□□□□□ -0.59
CAPRIN1-217ENST00000534825 C5orf38Q86SI9 138 aa11.34□□□□□ -0.59
CAPRIN1-217ENST00000534825 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
CAPRIN1-217ENST00000534825 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
CAPRIN1-217ENST00000534825 A0A096LNJ9 63 aa11.33□□□□□ -0.6
CAPRIN1-217ENST00000534825 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
CAPRIN1-217ENST00000534825 ZNF561-AS1K7EIQ3 104 aa11.33□□□□□ -0.6
CAPRIN1-217ENST00000534825 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
CAPRIN1-217ENST00000534825 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
CAPRIN1-217ENST00000534825 MALP21145 153 aa11.32□□□□□ -0.6
CAPRIN1-217ENST00000534825 FAM19A3Q7Z5A8 133 aa11.32□□□□□ -0.6
CAPRIN1-217ENST00000534825 IGLV4-69A0A075B6H9 119 aa11.31□□□□□ -0.6
CAPRIN1-217ENST00000534825 TRGC2P03986 189 aa11.31□□□□□ -0.6
CAPRIN1-217ENST00000534825 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-217ENST00000534825 SYCNQ0VAF6 134 aa11.31□□□□□ -0.6
CAPRIN1-217ENST00000534825 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
CAPRIN1-217ENST00000534825 A0A096LNI7 61 aa11.3□□□□□ -0.6
CAPRIN1-217ENST00000534825 G0S2P27469 103 aa11.3□□□□□ -0.6
CAPRIN1-217ENST00000534825 UBE2D1P51668 147 aa11.3□□□□□ -0.6
CAPRIN1-217ENST00000534825 LINC00242Q5T6M2 205 aa11.3□□□□□ -0.6
CAPRIN1-217ENST00000534825 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
CAPRIN1-217ENST00000534825 LRP1Q07954 4544 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-217ENST00000534825 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
CAPRIN1-217ENST00000534825 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
CAPRIN1-217ENST00000534825 MAJINQ3KP22 176 aa11.29□□□□□ -0.6
CAPRIN1-217ENST00000534825 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-217ENST00000534825 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-217ENST00000534825 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
CAPRIN1-217ENST00000534825 Q6ZRU5 148 aa11.28□□□□□ -0.6
CAPRIN1-217ENST00000534825 ERASQ7Z444 233 aa11.28□□□□□ -0.6
CAPRIN1-217ENST00000534825 APOMO95445 188 aa11.27□□□□□ -0.61
CAPRIN1-217ENST00000534825 ZC2HC1BQ5TFG8 222 aa11.27□□□□□ -0.61
CAPRIN1-217ENST00000534825 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
CAPRIN1-217ENST00000534825 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
CAPRIN1-217ENST00000534825 Q6ZN92 141 aa11.26□□□□□ -0.61
CAPRIN1-217ENST00000534825 STPG4Q8N801 248 aa11.26□□□□□ -0.61
CAPRIN1-217ENST00000534825 A0A087WZ39 114 aa11.25□□□□□ -0.61
CAPRIN1-217ENST00000534825 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
CAPRIN1-217ENST00000534825 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
CAPRIN1-217ENST00000534825 LINC00614P0C842 121 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 OR10D4PQ8NGN7 298 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 C2orf88Q9BSF0 95 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 VCX2Q9H322 139 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 FAT3Q8TDW7 4589 aa11.24□□□□□ -0.61
CAPRIN1-217ENST00000534825 SPAG11BQ08648 103 aa11.23□□□□□ -0.61
CAPRIN1-217ENST00000534825 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
CAPRIN1-217ENST00000534825 LINC01561Q8N1V8 128 aa11.23□□□□□ -0.61
CAPRIN1-217ENST00000534825 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
CAPRIN1-217ENST00000534825 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
CAPRIN1-217ENST00000534825 LOC107984640A0A0U1RRK4 108 aa11.22□□□□□ -0.61
CAPRIN1-217ENST00000534825 J3QL48 77 aa11.22□□□□□ -0.61
CAPRIN1-217ENST00000534825 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
CAPRIN1-217ENST00000534825 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
CAPRIN1-217ENST00000534825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
CAPRIN1-217ENST00000534825 HBDP02042 147 aa11.21□□□□□ -0.61
CAPRIN1-217ENST00000534825 LINC00310P59036 64 aa11.21□□□□□ -0.61
CAPRIN1-217ENST00000534825 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
CAPRIN1-217ENST00000534825 RNF151Q2KHN1 245 aa11.21□□□□□ -0.61
CAPRIN1-217ENST00000534825 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 F8WDY8 70 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 RAB5BP61020 215 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 CHCHD1Q96BP2 118 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 MRPL35Q9NZE8 188 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-217ENST00000534825 OXTP01178 125 aa11.19□□□□□ -0.62
CAPRIN1-217ENST00000534825 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
CAPRIN1-217ENST00000534825 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
CAPRIN1-217ENST00000534825 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms