RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	OR5A1	Q8NGJ0	315 aa		3.57	□□□□□ -1.84
PICALM-223	ENST00000534412	STOML3	Q8TAV4	291 aa		3.57	□□□□□ -1.84
PICALM-223	ENST00000534412	ISOC2	Q96AB3	205 aa		3.57	□□□□□ -1.84
PICALM-223	ENST00000534412	MAP1LC3B	Q9GZQ8	125 aa		3.57	□□□□□ -1.84
PICALM-223	ENST00000534412	CRCT1	Q9UGL9	99 aa		3.57	□□□□□ -1.84
PICALM-223	ENST00000534412	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	UPK1B	O75841	260 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	TRGC1	P0CF51	173 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	BCL2	P10415	239 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	NDUFV3	P56181	108 aa	Known RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	IFITM3	Q01628	133 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	KRTAP13-3	Q3SY46	172 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	RPL7L1	Q6DKI1	246 aa	Known RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	RNASEK	Q6P5S7	137 aa	Known RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	BAGE2	Q86Y30	109 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	KRTAP11-1	Q8IUC1	163 aa		3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.56	□□□□□ -1.84
PICALM-223	ENST00000534412	IGLV4-69	A0A075B6H9	119 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412		F2Z2F3	143 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	APCS	P02743	223 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	UBE2D1	P51668	147 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	EIF5A	P63241	154 aa	Known RBP	3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	AKR1C8P	Q5T2L2	129 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	TSKU	Q8WUA8	353 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	TPPP3	Q9BW30	176 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	CNFN	Q9BYD5	112 aa		3.55	□□□□□ -1.84
PICALM-223	ENST00000534412	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	C19orf71	A6NCJ1	209 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	ESD	P10768	282 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	CTRL	P40313	264 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	RPS20	P60866	119 aa	Known RBP	3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	RPL18A	Q02543	176 aa	Known RBP	3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	EIF5AL1	Q6IS14	154 aa	Known RBP	3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	MRPL52	Q86TS9	123 aa	Known RBP	3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	GATD1	Q8NB37	220 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	S100Z	Q8WXG8	99 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	CAMK2N2	Q96S95	79 aa		3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	RPP21	Q9H633	154 aa	Known RBP	3.54	□□□□□ -1.84
PICALM-223	ENST00000534412	IGLV4-3	A0A075B6K6	122 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	SDHAF1	A6NFY7	115 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	BCL2L11	O43521	198 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	RPL35	P42766	123 aa	Known RBP	3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	SS18	Q15532	418 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	TPRXL	Q17RH7	258 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412		Q5BKY6	102 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	TMUB2	Q71RG4	321 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	C9orf62	Q8N4C0	152 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	OR2D3	Q8NGH3	330 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	C11orf52	Q96A22	123 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	RPL39L	Q96EH5	51 aa	Known RBP	3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	SMIM12	Q96EX1	92 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	TMEM101	Q96IK0	257 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	BTF3L4	Q96K17	158 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	FAM210A	Q96ND0	272 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	CDC42SE2	Q9NRR3	84 aa		3.53	□□□□□ -1.84
PICALM-223	ENST00000534412	TRBV6-5	A0A0K0K1A5	114 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	FAM168B	A1KXE4	195 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	XKRY2	A2RUG3	117 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412		G3V3Q6	166 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	COX7A2L	O14548	114 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	PFDN1	O60925	122 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	TLX1NB	P0CAT3	122 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	LCE3A	Q5TA76	89 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	LYZL1	Q6UWQ5	148 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	MBD3L1	Q8WWY6	194 aa		3.52	□□□□□ -1.85
PICALM-223	ENST00000534412	MRPL35	Q9NZE8	188 aa	Known RBP	3.52	□□□□□ -1.85
PICALM-223	ENST00000534412		A0A0U1RRA0	63 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	C1orf196	B1AJZ1	125 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412		F8WDY8	70 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412		I3L3M4	83 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	TSPAN13	O95857	204 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	GIP	P09681	153 aa	Predicted RBP	3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	CENPW	Q5EE01	88 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	TEX261	Q6UWH6	196 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	OR10D4P	Q8NGN7	298 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	SFT2D1	Q8WV19	159 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	MRAP2	Q96G30	205 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	CYTL1	Q9NRR1	136 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	CSDC2	Q9Y534	153 aa	Known RBP	3.51	□□□□□ -1.85
PICALM-223	ENST00000534412	ALG5	Q9Y673	324 aa		3.51	□□□□□ -1.85
PICALM-223	ENST00000534412		M0QXV9	152 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	ZNF861P	O60384	105 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	IFNA1	P01562	189 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	DEFA1	P59665	94 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	SPAG11B	Q08648	103 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	LINC00518	Q8N0U6	118 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	IMMP2L	Q96T52	175 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	OCR1	Q9BZK8	76 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	SMDT1	Q9H4I9	107 aa		3.5	□□□□□ -1.85
PICALM-223	ENST00000534412	OBSCN	Q5VST9	7968 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	TRBV20OR9-2	A0A075B6H5	130 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	FXYD6-FXYD2	A0A087WZ82	144 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	TRBV27	A0A0K0K1C4	114 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	C7orf77	A4D0Y5	90 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	UMAD1	C9J7I0	102 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	CCL20	P78556	96 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	KCNRG	Q8N5I3	272 aa		3.49	□□□□□ -1.85
PICALM-223	ENST00000534412	FAM213B	Q8TBF2	198 aa		3.49	□□□□□ -1.85

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