RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
CAPN1-228ENST00000534373 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
CAPN1-228ENST00000534373 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 TMEM136Q6ZRR5 245 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 RAB5AP20339 215 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 OR10D4PQ8NGN7 298 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
CAPN1-228ENST00000534373 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
CAPN1-228ENST00000534373 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
CAPN1-228ENST00000534373 PRELID3AQ96N28 172 aa8.36□□□□□ -1.07
CAPN1-228ENST00000534373 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
CAPN1-228ENST00000534373 SPINK6Q6UWN8 80 aa8.35□□□□□ -1.07
CAPN1-228ENST00000534373 Q6ZRP5 223 aa8.35□□□□□ -1.07
CAPN1-228ENST00000534373 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-228ENST00000534373 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
CAPN1-228ENST00000534373 LINC01600Q96MT4 127 aa8.34□□□□□ -1.07
CAPN1-228ENST00000534373 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
CAPN1-228ENST00000534373 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
CAPN1-228ENST00000534373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-228ENST00000534373 IMMP2LQ96T52 175 aa8.33□□□□□ -1.08
CAPN1-228ENST00000534373 OPRPNQ99935 248 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-228ENST00000534373 A0A1W2PNN7 141 aa8.32□□□□□ -1.08
CAPN1-228ENST00000534373 K7EMI3 77 aa8.32□□□□□ -1.08
CAPN1-228ENST00000534373 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
CAPN1-228ENST00000534373 ORAOV1Q8WV07 137 aa8.32□□□□□ -1.08
CAPN1-228ENST00000534373 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
CAPN1-228ENST00000534373 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
CAPN1-228ENST00000534373 A0A087WZ39 114 aa8.31□□□□□ -1.08
CAPN1-228ENST00000534373 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
CAPN1-228ENST00000534373 NDUFA1O15239 70 aa8.31□□□□□ -1.08
CAPN1-228ENST00000534373 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
CAPN1-228ENST00000534373 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
CAPN1-228ENST00000534373 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
CAPN1-228ENST00000534373 CARHSP1Q9Y2V2 147 aaKnown RBP8.31□□□□□ -1.08
CAPN1-228ENST00000534373 IGLV4-3A0A075B6K6 122 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 NPSP0C0P6 89 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 TLX1NBP0CAT3 122 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 S100PP25815 95 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
CAPN1-228ENST00000534373 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 Q8N8P6 123 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
CAPN1-228ENST00000534373 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 APOC3P02656 99 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 RHEBQ15382 184 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 NDUFA5Q16718 116 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 ORMDL2Q53FV1 153 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 LINC00242Q5T6M2 205 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 CYSLTR1Q9Y271 337 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 TNXBP22105 4242 aa8.29□□□□□ -1.08
CAPN1-228ENST00000534373 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
CAPN1-228ENST00000534373 G0S2P27469 103 aa8.28□□□□□ -1.08
CAPN1-228ENST00000534373 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
CAPN1-228ENST00000534373 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 UBE2D1P51668 147 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 UNQ6190/PRO20217Q6UXQ8 127 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 Q6ZN92 141 aa8.27□□□□□ -1.09
CAPN1-228ENST00000534373 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
CAPN1-228ENST00000534373 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 AMELXQ99217 191 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 VCX2Q9H322 139 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 PSORS1C2Q9UIG4 136 aa8.26□□□□□ -1.09
CAPN1-228ENST00000534373 TRAV9-1A0A075B6T8 112 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 MT-ND6P03923 174 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 PAPPA-AS1Q5QFB9 102 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 SVBPQ8N300 66 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
CAPN1-228ENST00000534373 IGIPA6NJ69 53 aa8.24□□□□□ -1.09
CAPN1-228ENST00000534373 SNAPINO95295 136 aa8.24□□□□□ -1.09
CAPN1-228ENST00000534373 SEC11AP67812 179 aa8.24□□□□□ -1.09
CAPN1-228ENST00000534373 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
CAPN1-228ENST00000534373 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
CAPN1-228ENST00000534373 LINC00173Q6ZV60 143 aa8.23□□□□□ -1.09
CAPN1-228ENST00000534373 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
CAPN1-228ENST00000534373 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
CAPN1-228ENST00000534373 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
CAPN1-228ENST00000534373 SLC7A5P1Q8MH63 180 aa8.22□□□□□ -1.09
CAPN1-228ENST00000534373 TIMM17AQ99595 171 aa8.22□□□□□ -1.09
CAPN1-228ENST00000534373 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
CAPN1-228ENST00000534373 PRSS2P07478 247 aa8.21□□□□□ -1.1
CAPN1-228ENST00000534373 HERVK_113P63121 156 aa8.21□□□□□ -1.1
CAPN1-228ENST00000534373 GAGE2EQ4V326 116 aa8.21□□□□□ -1.1
CAPN1-228ENST00000534373 GAGE2DQ9UEU5 116 aa8.21□□□□□ -1.1
CAPN1-228ENST00000534373 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
CAPN1-228ENST00000534373 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
CAPN1-228ENST00000534373 Q8IZM0 81 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms