RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SPAG11BQ08648 103 aa11.96□□□□□ -0.49
LRRK1-210ENST00000534045 Q6ZRU5 148 aa11.96□□□□□ -0.49
LRRK1-210ENST00000534045 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
LRRK1-210ENST00000534045 SERTAD4-AS1Q5TG53 156 aa11.95□□□□□ -0.5
LRRK1-210ENST00000534045 OR10D4PQ8NGN7 298 aa11.95□□□□□ -0.5
LRRK1-210ENST00000534045 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
LRRK1-210ENST00000534045 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
LRRK1-210ENST00000534045 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
LRRK1-210ENST00000534045 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
LRRK1-210ENST00000534045 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
LRRK1-210ENST00000534045 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
LRRK1-210ENST00000534045 Q6ZN92 141 aa11.93□□□□□ -0.5
LRRK1-210ENST00000534045 Q8N8P6 123 aa11.93□□□□□ -0.5
LRRK1-210ENST00000534045 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
LRRK1-210ENST00000534045 RPL18AQ02543 176 aaKnown RBP11.92□□□□□ -0.5
LRRK1-210ENST00000534045 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
LRRK1-210ENST00000534045 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
LRRK1-210ENST00000534045 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
LRRK1-210ENST00000534045 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
LRRK1-210ENST00000534045 F8WDY8 70 aa11.91□□□□□ -0.5
LRRK1-210ENST00000534045 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
LRRK1-210ENST00000534045 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
LRRK1-210ENST00000534045 NDUFA1O15239 70 aa11.9□□□□□ -0.5
LRRK1-210ENST00000534045 G0S2P27469 103 aa11.9□□□□□ -0.5
LRRK1-210ENST00000534045 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
LRRK1-210ENST00000534045 VCX2Q9H322 139 aa11.9□□□□□ -0.5
LRRK1-210ENST00000534045 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
LRRK1-210ENST00000534045 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
LRRK1-210ENST00000534045 K7EMI3 77 aa11.89□□□□□ -0.51
LRRK1-210ENST00000534045 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
LRRK1-210ENST00000534045 C2orf66Q6UXQ4 117 aa11.89□□□□□ -0.51
LRRK1-210ENST00000534045 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
LRRK1-210ENST00000534045 A0A0J9YXV3 536 aa11.88□□□□□ -0.51
LRRK1-210ENST00000534045 S100PP25815 95 aa11.88□□□□□ -0.51
LRRK1-210ENST00000534045 PRR3P79522 188 aaKnown RBP11.88□□□□□ -0.51
LRRK1-210ENST00000534045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.87□□□□□ -0.51
LRRK1-210ENST00000534045 Q6ZRP5 223 aa11.87□□□□□ -0.51
LRRK1-210ENST00000534045 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
LRRK1-210ENST00000534045 LINC00242Q5T6M2 205 aa11.86□□□□□ -0.51
LRRK1-210ENST00000534045 LRP1Q07954 4544 aaKnown RBP11.86□□□□□ -0.51
LRRK1-210ENST00000534045 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
LRRK1-210ENST00000534045 A0A087WZ39 114 aa11.85□□□□□ -0.51
LRRK1-210ENST00000534045 C9orf116Q5BN46 136 aaPredicted RBP11.85□□□□□ -0.51
LRRK1-210ENST00000534045 PAPPA-AS1Q5QFB9 102 aa11.85□□□□□ -0.51
LRRK1-210ENST00000534045 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
LRRK1-210ENST00000534045 KIAA1644Q3SXP7 199 aa11.84□□□□□ -0.51
LRRK1-210ENST00000534045 SEC11CQ9BY50 192 aa11.84□□□□□ -0.51
LRRK1-210ENST00000534045 PRSS2P07478 247 aa11.83□□□□□ -0.52
LRRK1-210ENST00000534045 ADCYAP1P18509 176 aa11.83□□□□□ -0.52
LRRK1-210ENST00000534045 UBE2D1P51668 147 aa11.83□□□□□ -0.52
LRRK1-210ENST00000534045 IFITM2Q01629 132 aa11.83□□□□□ -0.52
LRRK1-210ENST00000534045 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
LRRK1-210ENST00000534045 PACRGQ96M98 296 aaPredicted RBP11.83□□□□□ -0.52
LRRK1-210ENST00000534045 NPSP0C0P6 89 aa11.82□□□□□ -0.52
LRRK1-210ENST00000534045 PKHD1L1Q86WI1 4243 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 SEC11AP67812 179 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 C10orf25Q5T742 122 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 COMMD7Q86VX2 200 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 PLA2G2DQ9UNK4 145 aa11.81□□□□□ -0.52
LRRK1-210ENST00000534045 MT-ND6P03923 174 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 GAGE2EQ4V326 116 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 LINC01561Q8N1V8 128 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 AMELXQ99217 191 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 GAGE2DQ9UEU5 116 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 FAT3Q8TDW7 4589 aa11.8□□□□□ -0.52
LRRK1-210ENST00000534045 IGIPA6NJ69 53 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 CKS1BP61024 79 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 COX19Q49B96 90 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
LRRK1-210ENST00000534045 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
LRRK1-210ENST00000534045 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
LRRK1-210ENST00000534045 TLX1NBP0CAT3 122 aa11.78□□□□□ -0.52
LRRK1-210ENST00000534045 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
LRRK1-210ENST00000534045 HERVK_113P63121 156 aa11.77□□□□□ -0.53
LRRK1-210ENST00000534045 KIAA0087Q14695 138 aa11.77□□□□□ -0.53
LRRK1-210ENST00000534045 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
LRRK1-210ENST00000534045 TOMM6Q96B49 74 aa11.77□□□□□ -0.53
LRRK1-210ENST00000534045 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
LRRK1-210ENST00000534045 RPS10P5Q9NQ39 176 aa11.77□□□□□ -0.53
LRRK1-210ENST00000534045 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
LRRK1-210ENST00000534045 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
LRRK1-210ENST00000534045 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 MT1HL1P0DM35 61 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 ERASQ7Z444 233 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 LINC01600Q96MT4 127 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 ALKBH7Q9BT30 221 aaPredicted RBP11.75□□□□□ -0.53
LRRK1-210ENST00000534045 SMCO4Q9NRQ5 59 aa11.75□□□□□ -0.53
LRRK1-210ENST00000534045 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
LRRK1-210ENST00000534045 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
LRRK1-210ENST00000534045 PSORS1C2Q9UIG4 136 aa11.74□□□□□ -0.53
LRRK1-210ENST00000534045 NDUFC2-KCTD14E9PQ53 114 aa11.73□□□□□ -0.53
LRRK1-210ENST00000534045 SRSF9Q13242 221 aaKnown RBP eCLIP11.73□□□□□ -0.53
LRRK1-210ENST00000534045 RHEBQ15382 184 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms