RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PRR3P79522 188 aaKnown RBP5.97□□□□□ -1.45
SSBP3-215ENST00000533946 UNQ6190/PRO20217Q6UXQ8 127 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 ORMDL3Q8N138 153 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 F8W036 122 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 PPP1R17O96001 155 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 MALP21145 153 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 C2orf82Q6UX34 121 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
SSBP3-215ENST00000533946 LPAP08519 4548 aa5.96□□□□□ -1.46
SSBP3-215ENST00000533946 TMEM218A2RU14 115 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 IFITM10A6NMD0 228 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-215ENST00000533946 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
SSBP3-215ENST00000533946 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
SSBP3-215ENST00000533946 ATP5L2Q7Z4Y8 100 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 ORAOV1Q8WV07 137 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 C6orf48Q9UBA6 75 aa5.95□□□□□ -1.46
SSBP3-215ENST00000533946 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 MT-ND4LP03901 98 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 UBE2D1P51668 147 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 Q8N8P6 123 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 ANAPC16Q96DE5 110 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 SPANXA1Q9NS26 97 aa5.94□□□□□ -1.46
SSBP3-215ENST00000533946 IGIPA6NJ69 53 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 PPBPP02775 128 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 S100A8P05109 93 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 RAB14P61106 215 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
SSBP3-215ENST00000533946 SRSF9Q13242 221 aaKnown RBP eCLIP5.93□□□□□ -1.46
SSBP3-215ENST00000533946 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 Q6ZRP5 223 aa5.93□□□□□ -1.46
SSBP3-215ENST00000533946 LOC107984640A0A0U1RRK4 108 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 APOMO95445 188 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 PNRC1Q12796 327 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-215ENST00000533946 C2orf48Q96LS8 159 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 AMELXQ99217 191 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 MAP1LC3AQ9H492 121 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
SSBP3-215ENST00000533946 A0A087WZ39 114 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 RAB5AP20339 215 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 COMMD7Q86VX2 200 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 C7orf33Q8WU49 177 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 TMEM18Q96B42 140 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 TMEM141Q96I45 108 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 PYGO1Q9Y3Y4 419 aa5.91□□□□□ -1.46
SSBP3-215ENST00000533946 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
SSBP3-215ENST00000533946 URB1-AS1Q96HZ7 61 aa5.9□□□□□ -1.46
SSBP3-215ENST00000533946 CTDSP1Q9GZU7 261 aa5.9□□□□□ -1.46
SSBP3-215ENST00000533946 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 C10orf91Q5T1B1 145 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 FAM19A5Q7Z5A7 132 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-215ENST00000533946 LINC00469Q8N7U9 141 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 OR10D4PQ8NGN7 298 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 ALKBH7Q9BT30 221 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-215ENST00000533946 MRPL35Q9NZE8 188 aaKnown RBP5.89□□□□□ -1.47
SSBP3-215ENST00000533946 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
SSBP3-215ENST00000533946 TGIF2-C20orf24A0A0A6YYL0 155 aa5.88□□□□□ -1.47
SSBP3-215ENST00000533946 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
SSBP3-215ENST00000533946 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
SSBP3-215ENST00000533946 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
SSBP3-215ENST00000533946 A0A096LNJ9 63 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 NDUFA1O15239 70 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 SMAGPQ0VAQ4 97 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 SEC11CQ9BY50 192 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 VCX2Q9H322 139 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 LAMTOR2Q9Y2Q5 125 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
SSBP3-215ENST00000533946 C1orf137Q5JT78 98 aa5.86□□□□□ -1.47
SSBP3-215ENST00000533946 XAGE1AQ9HD64 81 aa5.86□□□□□ -1.47
SSBP3-215ENST00000533946 LINC00474Q9P2X8 69 aa5.86□□□□□ -1.47
SSBP3-215ENST00000533946 LINC01546A6NGU7 62 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 PMCHL1Q16048 86 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 ORMDL2Q53FV1 153 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 FAM19A3Q7Z5A8 133 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 MRPL18Q9H0U6 180 aaKnown RBP5.85□□□□□ -1.47
SSBP3-215ENST00000533946 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
SSBP3-215ENST00000533946 RPS10P5Q9NQ39 176 aa5.85□□□□□ -1.47
SSBP3-215ENST00000533946 MT-ND6P03923 174 aa5.84□□□□□ -1.47
SSBP3-215ENST00000533946 FABP9Q0Z7S8 132 aa5.84□□□□□ -1.47
SSBP3-215ENST00000533946 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
SSBP3-215ENST00000533946 SCGB3A1Q96QR1 104 aa5.84□□□□□ -1.47
SSBP3-215ENST00000533946 GNB1LQ9BYB4 327 aa5.84□□□□□ -1.47
SSBP3-215ENST00000533946 CARHSP1Q9Y2V2 147 aaKnown RBP5.84□□□□□ -1.47
SSBP3-215ENST00000533946 SMIM1B2RUZ4 78 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms