RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PTTG1IPP53801 180 aa7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 TRBV6-5A0A0K0K1A5 114 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 A0A1B0GUT8 65 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 IGKV2-29A2NJV5 120 aaPredicted RBP7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 FGF6P10767 208 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 UBE2V1Q13404 147 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 SMIM7Q9BQ49 75 aa7.93□□□□□ -1.14
CAPRIN1-213ENST00000533562 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
CAPRIN1-213ENST00000533562 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
CAPRIN1-213ENST00000533562 TSKUQ8WUA8 353 aa7.92□□□□□ -1.14
CAPRIN1-213ENST00000533562 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
CAPRIN1-213ENST00000533562 ST20Q9HBF5 79 aa7.92□□□□□ -1.14
CAPRIN1-213ENST00000533562 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
CAPRIN1-213ENST00000533562 HIGD1CA8MV81 97 aa7.91□□□□□ -1.14
CAPRIN1-213ENST00000533562 C15orf56Q8N910 161 aa7.91□□□□□ -1.14
CAPRIN1-213ENST00000533562 OR5A1Q8NGJ0 315 aa7.91□□□□□ -1.14
CAPRIN1-213ENST00000533562 A0A087WYN8 130 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 K7ERU9 68 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 HIGD2BQ4VC39 106 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 OSTCQ9NRP0 149 aa7.9□□□□□ -1.14
CAPRIN1-213ENST00000533562 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
CAPRIN1-213ENST00000533562 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
CAPRIN1-213ENST00000533562 COX6A2Q02221 97 aa7.89□□□□□ -1.15
CAPRIN1-213ENST00000533562 ALKBH7Q9BT30 221 aaPredicted RBP7.89□□□□□ -1.15
CAPRIN1-213ENST00000533562 TRBV27A0A0K0K1C4 114 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 PPP1R17O96001 155 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 TSHBP01222 138 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 XCL1P47992 114 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 POLR2KP53803 58 aaKnown RBP7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 FOXI1Q12951 378 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 RIGQ13278 110 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 SS18Q15532 418 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 ADIRFQ15847 76 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 PMCHL1Q16048 86 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 Q6ZRU5 148 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
CAPRIN1-213ENST00000533562 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
CAPRIN1-213ENST00000533562 VCYO14598 125 aa7.87□□□□□ -1.15
CAPRIN1-213ENST00000533562 MT-ND6P03923 174 aa7.87□□□□□ -1.15
CAPRIN1-213ENST00000533562 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
CAPRIN1-213ENST00000533562 PKIGQ9Y2B9 76 aa7.87□□□□□ -1.15
CAPRIN1-213ENST00000533562 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 CCL25O15444 150 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 SCGB1A1P11684 91 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 SMAGPQ0VAQ4 97 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 AMN1Q8IY45 258 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 NUP35Q8NFH5 326 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 PRSS3P2Q8NHM4 247 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 LAMTOR2Q9Y2Q5 125 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 V9GYV3 84 aa7.86□□□□□ -1.15
CAPRIN1-213ENST00000533562 IGKV2-24A0A0C4DH68 120 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 FCER1GP30273 86 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 RPL23P62829 140 aaKnown RBP7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 CD164L2Q6UWJ8 174 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
CAPRIN1-213ENST00000533562 SUMO2P61956 95 aaKnown RBP7.84□□□□□ -1.15
CAPRIN1-213ENST00000533562 STPG4Q8N801 248 aa7.84□□□□□ -1.15
CAPRIN1-213ENST00000533562 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
CAPRIN1-213ENST00000533562 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.15
CAPRIN1-213ENST00000533562 HMCN2Q8NDA2 5059 aa7.83□□□□□ -1.16
CAPRIN1-213ENST00000533562 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
CAPRIN1-213ENST00000533562 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
CAPRIN1-213ENST00000533562 A0A1B0GW15 77 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 MALP21145 153 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 BATFQ16520 125 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 FAM104BQ5XKR9 115 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 NRACQ8N912 160 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
CAPRIN1-213ENST00000533562 A0A096LNI7 61 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 SMIM27A0A1W2PRY6 76 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 IGLC3P0DOY3 106 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 CAMPP49913 170 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 SYCNQ0VAF6 134 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 SPATA45Q537H7 98 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 Q6ZN92 141 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 LINC00526Q96FQ7 95 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 PAM16Q9Y3D7 125 aa7.81□□□□□ -1.16
CAPRIN1-213ENST00000533562 TMEM238C9JI98 176 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 COX7A2LO14548 114 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 CKS2P33552 79 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms