RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
CPSF1-210ENST00000532935 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
CPSF1-210ENST00000532935 LINC00959A0A1B0GUT2 108 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 SMAGPQ0VAQ4 97 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 FOXI1Q12951 378 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 CFAP161Q6P656 301 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 LINC00518Q8N0U6 118 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
CPSF1-210ENST00000532935 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
CPSF1-210ENST00000532935 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 CCL25O15444 150 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 XCL1P47992 114 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
CPSF1-210ENST00000532935 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
CPSF1-210ENST00000532935 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 Q8N8P6 123 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
CPSF1-210ENST00000532935 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-210ENST00000532935 SS18Q15532 418 aa9.92□□□□□ -0.82
CPSF1-210ENST00000532935 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
CPSF1-210ENST00000532935 SLPIP03973 132 aa9.91□□□□□ -0.82
CPSF1-210ENST00000532935 RPL39P62891 51 aaKnown RBP9.91□□□□□ -0.82
CPSF1-210ENST00000532935 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
CPSF1-210ENST00000532935 G0S2P27469 103 aa9.9□□□□□ -0.82
CPSF1-210ENST00000532935 HIGD2BQ4VC39 106 aa9.9□□□□□ -0.82
CPSF1-210ENST00000532935 RNASE13Q5GAN3 156 aaKnown RBP9.9□□□□□ -0.82
CPSF1-210ENST00000532935 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
CPSF1-210ENST00000532935 HSPB8Q9UJY1 196 aa9.9□□□□□ -0.82
CPSF1-210ENST00000532935 LOC389332A0A1B0GUA5 103 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 PYY3Q5JQD4 70 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 Q6ZUT4 128 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 C12orf57Q99622 126 aa9.89□□□□□ -0.83
CPSF1-210ENST00000532935 IGHV3-64A0A075B6Q5 118 aa9.88□□□□□ -0.83
CPSF1-210ENST00000532935 GVQW2A0A096LPI5 108 aaPredicted RBP9.88□□□□□ -0.83
CPSF1-210ENST00000532935 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
CPSF1-210ENST00000532935 INAFM2P0DMQ5 153 aa9.88□□□□□ -0.83
CPSF1-210ENST00000532935 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
CPSF1-210ENST00000532935 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
CPSF1-210ENST00000532935 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
CPSF1-210ENST00000532935 HBDP02042 147 aa9.87□□□□□ -0.83
CPSF1-210ENST00000532935 ORMDL2Q53FV1 153 aa9.87□□□□□ -0.83
CPSF1-210ENST00000532935 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
CPSF1-210ENST00000532935 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
CPSF1-210ENST00000532935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-210ENST00000532935 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
CPSF1-210ENST00000532935 PANO1I0J062 215 aa9.85□□□□□ -0.83
CPSF1-210ENST00000532935 MRPS36P82909 103 aaKnown RBP9.85□□□□□ -0.83
CPSF1-210ENST00000532935 COX7A2LO14548 114 aa9.84□□□□□ -0.83
CPSF1-210ENST00000532935 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
CPSF1-210ENST00000532935 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
CPSF1-210ENST00000532935 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-210ENST00000532935 MAP1LC3CQ9BXW4 147 aa9.84□□□□□ -0.83
CPSF1-210ENST00000532935 A0A096LNJ9 63 aa9.83□□□□□ -0.84
CPSF1-210ENST00000532935 SCGB1D1O95968 90 aa9.83□□□□□ -0.84
CPSF1-210ENST00000532935 KRTDAPP60985 99 aa9.83□□□□□ -0.84
CPSF1-210ENST00000532935 S100A12P80511 92 aa9.83□□□□□ -0.84
CPSF1-210ENST00000532935 PET117Q6UWS5 81 aa9.83□□□□□ -0.84
CPSF1-210ENST00000532935 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
CPSF1-210ENST00000532935 C20orf202A1L168 122 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 ATP5LO75964 103 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 MALP21145 153 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
CPSF1-210ENST00000532935 PMCHL1Q16048 86 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
CPSF1-210ENST00000532935 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
CPSF1-210ENST00000532935 ZNF561-AS1K7EIQ3 104 aa9.81□□□□□ -0.84
CPSF1-210ENST00000532935 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
CPSF1-210ENST00000532935 COX6A2Q02221 97 aa9.81□□□□□ -0.84
CPSF1-210ENST00000532935 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
CPSF1-210ENST00000532935 PKHD1L1Q86WI1 4243 aa9.8□□□□□ -0.84
CPSF1-210ENST00000532935 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
CPSF1-210ENST00000532935 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 TOMM6Q96B49 74 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 CARD19Q96LW7 228 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 CYSLTR1Q9Y271 337 aa9.79□□□□□ -0.84
CPSF1-210ENST00000532935 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
CPSF1-210ENST00000532935 APOMO95445 188 aa9.78□□□□□ -0.84
CPSF1-210ENST00000532935 SYCNQ0VAF6 134 aa9.78□□□□□ -0.84
CPSF1-210ENST00000532935 A0A087WYN8 130 aa9.77□□□□□ -0.85
CPSF1-210ENST00000532935 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
CPSF1-210ENST00000532935 KRTAP10-4P60372 401 aaPredicted RBP9.77□□□□□ -0.85
CPSF1-210ENST00000532935 LINC01545Q5VT33 79 aa9.77□□□□□ -0.85
CPSF1-210ENST00000532935 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
CPSF1-210ENST00000532935 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.75□□□□□ -0.85
CPSF1-210ENST00000532935 NPSP0C0P6 89 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 Q6ZN92 141 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms