RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
GMDS-208ENST00000530927 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
GMDS-208ENST00000530927 MRPL52Q86TS9 123 aaKnown RBP12.15□□□□□ -0.46
GMDS-208ENST00000530927 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.46
GMDS-208ENST00000530927 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
GMDS-208ENST00000530927 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
GMDS-208ENST00000530927 LINC00310P59036 64 aa12.14□□□□□ -0.47
GMDS-208ENST00000530927 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
GMDS-208ENST00000530927 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
GMDS-208ENST00000530927 Q6ZSA8 131 aa12.13□□□□□ -0.47
GMDS-208ENST00000530927 ZNF664Q8N3J9 261 aa12.13□□□□□ -0.47
GMDS-208ENST00000530927 C15orf56Q8N910 161 aa12.13□□□□□ -0.47
GMDS-208ENST00000530927 LINC00959A0A1B0GUT2 108 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 SLPIP03973 132 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 XCL1P47992 114 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 Q6ZUT4 128 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
GMDS-208ENST00000530927 LINC01549A6NIU2 74 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 NUPR1O60356 82 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 FOXI1Q12951 378 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 CCL25O15444 150 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 DDTP30046 118 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
GMDS-208ENST00000530927 OPRPNQ99935 248 aaPredicted RBP12.11□□□□□ -0.47
GMDS-208ENST00000530927 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
GMDS-208ENST00000530927 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
GMDS-208ENST00000530927 CSDC2Q9Y534 153 aaKnown RBP12.1□□□□□ -0.47
GMDS-208ENST00000530927 HSBP1O75506 76 aa12.09□□□□□ -0.47
GMDS-208ENST00000530927 SCGB1D1O95968 90 aa12.09□□□□□ -0.47
GMDS-208ENST00000530927 LBHQ53QV2 105 aaPredicted RBP12.09□□□□□ -0.47
GMDS-208ENST00000530927 Q5VSD8 79 aa12.09□□□□□ -0.47
GMDS-208ENST00000530927 TOMM6Q96B49 74 aa12.09□□□□□ -0.47
GMDS-208ENST00000530927 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
GMDS-208ENST00000530927 VPS13BQ7Z7G8 4022 aa12.08□□□□□ -0.48
GMDS-208ENST00000530927 EPM2AB3EWF7 344 aa12.08□□□□□ -0.48
GMDS-208ENST00000530927 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
GMDS-208ENST00000530927 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
GMDS-208ENST00000530927 HBDP02042 147 aa12.07□□□□□ -0.48
GMDS-208ENST00000530927 TEX43Q6ZNM6 134 aa12.07□□□□□ -0.48
GMDS-208ENST00000530927 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
GMDS-208ENST00000530927 PANO1I0J062 215 aa12.06□□□□□ -0.48
GMDS-208ENST00000530927 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
GMDS-208ENST00000530927 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
GMDS-208ENST00000530927 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
GMDS-208ENST00000530927 A0A096LNJ9 63 aa12.05□□□□□ -0.48
GMDS-208ENST00000530927 SS18Q15532 418 aa12.05□□□□□ -0.48
GMDS-208ENST00000530927 IGIPA6NJ69 53 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 NPSP0C0P6 89 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
GMDS-208ENST00000530927 ERASQ7Z444 233 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 CIRBP-AS1Q8TBR5 109 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
GMDS-208ENST00000530927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.04□□□□□ -0.48
GMDS-208ENST00000530927 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
GMDS-208ENST00000530927 TMEM141Q96I45 108 aa12.03□□□□□ -0.48
GMDS-208ENST00000530927 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
GMDS-208ENST00000530927 CD164L2Q6UWJ8 174 aa12.03□□□□□ -0.48
GMDS-208ENST00000530927 SDIM1Q6ZPB5 146 aa12.03□□□□□ -0.48
GMDS-208ENST00000530927 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
GMDS-208ENST00000530927 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.49
GMDS-208ENST00000530927 PAPPA-AS1Q5QFB9 102 aa12.02□□□□□ -0.49
GMDS-208ENST00000530927 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
GMDS-208ENST00000530927 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
GMDS-208ENST00000530927 PRO1933Q9H354 126 aa12.02□□□□□ -0.49
GMDS-208ENST00000530927 SRRM2Q9UQ35 2752 aaKnown RBP12.01□□□□□ -0.49
GMDS-208ENST00000530927 IGLV4-3A0A075B6K6 122 aa12.01□□□□□ -0.49
GMDS-208ENST00000530927 Q6ZN92 141 aa12.01□□□□□ -0.49
GMDS-208ENST00000530927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
GMDS-208ENST00000530927 ATP5LO75964 103 aa12□□□□□ -0.49
GMDS-208ENST00000530927 CHTF8P0CG12 524 aa12□□□□□ -0.49
GMDS-208ENST00000530927 ZC2HC1BQ5TFG8 222 aa12□□□□□ -0.49
GMDS-208ENST00000530927 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
GMDS-208ENST00000530927 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
GMDS-208ENST00000530927 VAMP8Q9BV40 100 aa11.99□□□□□ -0.49
GMDS-208ENST00000530927 VCX2Q9H322 139 aa11.99□□□□□ -0.49
GMDS-208ENST00000530927 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
GMDS-208ENST00000530927 C20orf202A1L168 122 aa11.98□□□□□ -0.49
GMDS-208ENST00000530927 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
GMDS-208ENST00000530927 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.97□□□□□ -0.49
GMDS-208ENST00000530927 KRTDAPP60985 99 aa11.97□□□□□ -0.49
GMDS-208ENST00000530927 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 COX7A2LO14548 114 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 C3orf79P0CE67 100 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 AMELXQ99217 191 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 HSPB8Q9UJY1 196 aa11.96□□□□□ -0.49
GMDS-208ENST00000530927 COX6A2Q02221 97 aa11.95□□□□□ -0.5
GMDS-208ENST00000530927 IFI27L1Q96BM0 104 aa11.95□□□□□ -0.5
GMDS-208ENST00000530927 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
GMDS-208ENST00000530927 MALP21145 153 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 INAFM2P0DMQ5 153 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 PMVKQ15126 192 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 LINC00173Q6ZV60 143 aa11.94□□□□□ -0.5
GMDS-208ENST00000530927 CST9LQ9H4G1 147 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms