RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 A0A1B0GVG6 124 aa12.95□□□□□ -0.34
SMPD1-204ENST00000530395 PPBPP02775 128 aa12.95□□□□□ -0.34
SMPD1-204ENST00000530395 RNF151Q2KHN1 245 aa12.95□□□□□ -0.34
SMPD1-204ENST00000530395 A0A1B0GXF2 115 aa12.94□□□□□ -0.34
SMPD1-204ENST00000530395 NPYP01303 97 aa12.94□□□□□ -0.34
SMPD1-204ENST00000530395 MRPS36P82909 103 aaKnown RBP12.94□□□□□ -0.34
SMPD1-204ENST00000530395 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
SMPD1-204ENST00000530395 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
SMPD1-204ENST00000530395 IFITM10A6NMD0 228 aa12.93□□□□□ -0.34
SMPD1-204ENST00000530395 F8WDY8 70 aa12.93□□□□□ -0.34
SMPD1-204ENST00000530395 SRSF9Q13242 221 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMPD1-204ENST00000530395 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
SMPD1-204ENST00000530395 ORMDL3Q8N138 153 aa12.92□□□□□ -0.34
SMPD1-204ENST00000530395 OPRPNQ99935 248 aaPredicted RBP12.92□□□□□ -0.34
SMPD1-204ENST00000530395 MRPL35Q9NZE8 188 aaKnown RBP12.92□□□□□ -0.34
SMPD1-204ENST00000530395 LRP2P98164 4655 aa12.91□□□□□ -0.34
SMPD1-204ENST00000530395 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
SMPD1-204ENST00000530395 NDUFA1O15239 70 aa12.91□□□□□ -0.34
SMPD1-204ENST00000530395 RAB5AP20339 215 aa12.91□□□□□ -0.34
SMPD1-204ENST00000530395 ATP5L2Q7Z4Y8 100 aa12.91□□□□□ -0.34
SMPD1-204ENST00000530395 MT-ND6P03923 174 aa12.9□□□□□ -0.34
SMPD1-204ENST00000530395 IFI27P40305 119 aaPredicted RBP12.9□□□□□ -0.34
SMPD1-204ENST00000530395 FAM104AQ969W3 186 aa12.9□□□□□ -0.34
SMPD1-204ENST00000530395 IMMP2LQ96T52 175 aa12.9□□□□□ -0.34
SMPD1-204ENST00000530395 TGIF2-C20orf24A0A0A6YYL0 155 aa12.89□□□□□ -0.35
SMPD1-204ENST00000530395 KRTAP10-8P60410 259 aa12.89□□□□□ -0.35
SMPD1-204ENST00000530395 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
SMPD1-204ENST00000530395 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
SMPD1-204ENST00000530395 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
SMPD1-204ENST00000530395 PHF5AQ7RTV0 110 aaKnown RBP12.86□□□□□ -0.35
SMPD1-204ENST00000530395 PYGO1Q9Y3Y4 419 aa12.86□□□□□ -0.35
SMPD1-204ENST00000530395 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
SMPD1-204ENST00000530395 TLX1NBP0CAT3 122 aa12.84□□□□□ -0.35
SMPD1-204ENST00000530395 ODF1Q14990 250 aa12.84□□□□□ -0.35
SMPD1-204ENST00000530395 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
SMPD1-204ENST00000530395 A0A087WZ39 114 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 C10orf25Q5T742 122 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 UNQ6190/PRO20217Q6UXQ8 127 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 C6orf48Q9UBA6 75 aa12.83□□□□□ -0.36
SMPD1-204ENST00000530395 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
SMPD1-204ENST00000530395 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
SMPD1-204ENST00000530395 PNRC1Q12796 327 aaPredicted RBP12.81□□□□□ -0.36
SMPD1-204ENST00000530395 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
SMPD1-204ENST00000530395 TEX43Q6ZNM6 134 aa12.81□□□□□ -0.36
SMPD1-204ENST00000530395 C2orf88Q9BSF0 95 aa12.81□□□□□ -0.36
SMPD1-204ENST00000530395 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
SMPD1-204ENST00000530395 FAM168BA1KXE4 195 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 MT-ND4LP03901 98 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 GAGE2EQ4V326 116 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 Q6ZN92 141 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 FAM19A5Q7Z5A7 132 aaPredicted RBP12.79□□□□□ -0.36
SMPD1-204ENST00000530395 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 GAGE2DQ9UEU5 116 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 CYSLTR1Q9Y271 337 aa12.79□□□□□ -0.36
SMPD1-204ENST00000530395 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
SMPD1-204ENST00000530395 KIAA0087Q14695 138 aa12.78□□□□□ -0.36
SMPD1-204ENST00000530395 Q8N8P6 123 aa12.78□□□□□ -0.36
SMPD1-204ENST00000530395 DIRC1Q969H9 104 aa12.78□□□□□ -0.36
SMPD1-204ENST00000530395 IGLV7-43P04211 117 aa12.77□□□□□ -0.37
SMPD1-204ENST00000530395 PACRGQ96M98 296 aaPredicted RBP12.77□□□□□ -0.37
SMPD1-204ENST00000530395 UBE2D1P51668 147 aa12.76□□□□□ -0.37
SMPD1-204ENST00000530395 ORMDL2Q53FV1 153 aa12.76□□□□□ -0.37
SMPD1-204ENST00000530395 C2orf66Q6UXQ4 117 aa12.76□□□□□ -0.37
SMPD1-204ENST00000530395 LINC01561Q8N1V8 128 aa12.76□□□□□ -0.37
SMPD1-204ENST00000530395 RAB14P61106 215 aa12.75□□□□□ -0.37
SMPD1-204ENST00000530395 RNF213Q63HN8 5207 aa12.74□□□□□ -0.37
SMPD1-204ENST00000530395 NDUFC2-KCTD14E9PQ53 114 aa12.74□□□□□ -0.37
SMPD1-204ENST00000530395 K7EMI3 77 aa12.74□□□□□ -0.37
SMPD1-204ENST00000530395 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
SMPD1-204ENST00000530395 VCX2Q9H322 139 aa12.74□□□□□ -0.37
SMPD1-204ENST00000530395 M0QXV9 152 aa12.73□□□□□ -0.37
SMPD1-204ENST00000530395 PRSS2P07478 247 aa12.73□□□□□ -0.37
SMPD1-204ENST00000530395 NPSP0C0P6 89 aa12.73□□□□□ -0.37
SMPD1-204ENST00000530395 UBE2BP63146 152 aa12.73□□□□□ -0.37
SMPD1-204ENST00000530395 AMELXQ99217 191 aa12.72□□□□□ -0.37
SMPD1-204ENST00000530395 H0Y9J4 135 aa12.71□□□□□ -0.37
SMPD1-204ENST00000530395 ZC2HC1BQ5TFG8 222 aa12.71□□□□□ -0.37
SMPD1-204ENST00000530395 LINC00173Q6ZV60 143 aa12.71□□□□□ -0.37
SMPD1-204ENST00000530395 NXT2Q9NPJ8 142 aaKnown RBP12.71□□□□□ -0.37
SMPD1-204ENST00000530395 CKS1BP61024 79 aa12.7□□□□□ -0.38
SMPD1-204ENST00000530395 KRTAP11-1Q8IUC1 163 aa12.7□□□□□ -0.38
SMPD1-204ENST00000530395 CTDSP1Q9GZU7 261 aa12.7□□□□□ -0.38
SMPD1-204ENST00000530395 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
SMPD1-204ENST00000530395 G0S2P27469 103 aa12.69□□□□□ -0.38
SMPD1-204ENST00000530395 PAPPA-AS1Q5QFB9 102 aa12.69□□□□□ -0.38
SMPD1-204ENST00000530395 IGIPA6NJ69 53 aa12.68□□□□□ -0.38
SMPD1-204ENST00000530395 SEC11AP67812 179 aa12.68□□□□□ -0.38
SMPD1-204ENST00000530395 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
SMPD1-204ENST00000530395 KRTAP7-1Q8IUC3 87 aa12.68□□□□□ -0.38
SMPD1-204ENST00000530395 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
SMPD1-204ENST00000530395 FAM19A3Q7Z5A8 133 aa12.67□□□□□ -0.38
SMPD1-204ENST00000530395 Q8IZM0 81 aa12.67□□□□□ -0.38
SMPD1-204ENST00000530395 PRR26Q8N8Z3 221 aa12.67□□□□□ -0.38
SMPD1-204ENST00000530395 HERVK_113P63121 156 aa12.66□□□□□ -0.38
SMPD1-204ENST00000530395 ALKBH7Q9BT30 221 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-204ENST00000530395 GEMIN7Q9H840 131 aaKnown RBP12.65□□□□□ -0.38
SMPD1-204ENST00000530395 IGLV1-50A0A075B6I6 118 aa12.64□□□□□ -0.39
SMPD1-204ENST00000530395 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms