RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 IFITM10A6NMD0 228 aa7.81□□□□□ -1.16
USH1C-208ENST00000529563 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
USH1C-208ENST00000529563 CCL25O15444 150 aa7.81□□□□□ -1.16
USH1C-208ENST00000529563 XCL1P47992 114 aa7.81□□□□□ -1.16
USH1C-208ENST00000529563 RNASE13Q5GAN3 156 aaKnown RBP7.81□□□□□ -1.16
USH1C-208ENST00000529563 BAGE3Q86Y29 109 aa7.81□□□□□ -1.16
USH1C-208ENST00000529563 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
USH1C-208ENST00000529563 LINC00959A0A1B0GUT2 108 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 LINC00614P0C842 121 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 MALP21145 153 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 Q6ZUT4 128 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 TMEM141Q96I45 108 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 SCGB3A1Q96QR1 104 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 VCX2Q9H322 139 aa7.8□□□□□ -1.16
USH1C-208ENST00000529563 LRP1Q07954 4544 aaKnown RBP7.8□□□□□ -1.16
USH1C-208ENST00000529563 TRGC2P03986 189 aa7.79□□□□□ -1.16
USH1C-208ENST00000529563 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
USH1C-208ENST00000529563 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
USH1C-208ENST00000529563 SDIM1Q6ZPB5 146 aa7.79□□□□□ -1.16
USH1C-208ENST00000529563 C18orf32Q8TCD1 76 aa7.79□□□□□ -1.16
USH1C-208ENST00000529563 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
USH1C-208ENST00000529563 SCO1O75880 301 aa7.78□□□□□ -1.16
USH1C-208ENST00000529563 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
USH1C-208ENST00000529563 YPEL4Q96NS1 127 aa7.78□□□□□ -1.16
USH1C-208ENST00000529563 PANO1I0J062 215 aa7.77□□□□□ -1.17
USH1C-208ENST00000529563 CNBPP62633 177 aaKnown RBP7.77□□□□□ -1.17
USH1C-208ENST00000529563 Q6ZRU5 148 aa7.77□□□□□ -1.17
USH1C-208ENST00000529563 TOMM6Q96B49 74 aa7.77□□□□□ -1.17
USH1C-208ENST00000529563 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
USH1C-208ENST00000529563 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 COLCA2A8K830 154 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
USH1C-208ENST00000529563 COX7A2LO14548 114 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 ATP6V1G1O75348 118 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 HSBP1O75506 76 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 APOMO95445 188 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 NPSP0C0P6 89 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 NDUFA6P56556 154 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 KRTAP26-1Q6PEX3 210 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 CD164L2Q6UWJ8 174 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 ERASQ7Z444 233 aa7.76□□□□□ -1.17
USH1C-208ENST00000529563 A0A087WYN8 130 aa7.75□□□□□ -1.17
USH1C-208ENST00000529563 HBDP02042 147 aa7.75□□□□□ -1.17
USH1C-208ENST00000529563 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
USH1C-208ENST00000529563 SEC11AP67812 179 aa7.75□□□□□ -1.17
USH1C-208ENST00000529563 CHCHD1Q96BP2 118 aaKnown RBP7.75□□□□□ -1.17
USH1C-208ENST00000529563 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
USH1C-208ENST00000529563 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
USH1C-208ENST00000529563 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
USH1C-208ENST00000529563 IGHV1-58A0A0C4DH39 117 aa7.74□□□□□ -1.17
USH1C-208ENST00000529563 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
USH1C-208ENST00000529563 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
USH1C-208ENST00000529563 IGKV2-24A0A0C4DH68 120 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 ATP5LO75964 103 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 FOXI1Q12951 378 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 MAJINQ3KP22 176 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 C5orf38Q86SI9 138 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
USH1C-208ENST00000529563 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
USH1C-208ENST00000529563 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
USH1C-208ENST00000529563 COX6A2Q02221 97 aa7.72□□□□□ -1.17
USH1C-208ENST00000529563 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
USH1C-208ENST00000529563 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
USH1C-208ENST00000529563 HERVK_113P63121 156 aa7.71□□□□□ -1.18
USH1C-208ENST00000529563 PMVKQ15126 192 aa7.71□□□□□ -1.18
USH1C-208ENST00000529563 SLPIP03973 132 aa7.7□□□□□ -1.18
USH1C-208ENST00000529563 AMELXQ99217 191 aa7.7□□□□□ -1.18
USH1C-208ENST00000529563 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 PRSS2P07478 247 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 MT1HL1P0DM35 61 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 UBE2D1P51668 147 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 ZC2HC1BQ5TFG8 222 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 STPG4Q8N801 248 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 PKIGQ9Y2B9 76 aa7.69□□□□□ -1.18
USH1C-208ENST00000529563 SERF1AO75920 110 aa7.68□□□□□ -1.18
USH1C-208ENST00000529563 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
USH1C-208ENST00000529563 LINC00469Q8N7U9 141 aa7.68□□□□□ -1.18
USH1C-208ENST00000529563 ORAOV1Q8WV07 137 aa7.68□□□□□ -1.18
USH1C-208ENST00000529563 CST9LQ9H4G1 147 aa7.68□□□□□ -1.18
USH1C-208ENST00000529563 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
USH1C-208ENST00000529563 H3BRM9 83 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 LEPROTL1O95214 131 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 FAM19A2Q8N3H0 131 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 OR10D4PQ8NGN7 298 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 IFI27L1Q96BM0 104 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 URB1-AS1Q96HZ7 61 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 TOMM7Q9P0U1 55 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 HSPB8Q9UJY1 196 aa7.67□□□□□ -1.18
USH1C-208ENST00000529563 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
USH1C-208ENST00000529563 A0A0J9YXV3 536 aa7.66□□□□□ -1.18
USH1C-208ENST00000529563 H0Y8G0 127 aa7.66□□□□□ -1.18
USH1C-208ENST00000529563 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms