RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 TRBV24-1A0A075B6N3 115 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 D6R8Y8 96 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 TCAPO15273 167 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 MT-ND6P03923 174 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
CPSF1-204ENST00000529288 COMMD7Q86VX2 200 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 C2orf48Q96LS8 159 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
CPSF1-204ENST00000529288 F8W036 122 aa8.04□□□□□ -1.12
CPSF1-204ENST00000529288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
CPSF1-204ENST00000529288 RPL32P62910 135 aaKnown RBP8.04□□□□□ -1.12
CPSF1-204ENST00000529288 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
CPSF1-204ENST00000529288 PHF5AQ7RTV0 110 aaKnown RBP8.04□□□□□ -1.12
CPSF1-204ENST00000529288 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
CPSF1-204ENST00000529288 SEC11CQ9BY50 192 aa8.04□□□□□ -1.12
CPSF1-204ENST00000529288 IFITM10A6NMD0 228 aa8.03□□□□□ -1.12
CPSF1-204ENST00000529288 NPYP01303 97 aa8.03□□□□□ -1.12
CPSF1-204ENST00000529288 S100A8P05109 93 aa8.03□□□□□ -1.12
CPSF1-204ENST00000529288 C10orf91Q5T1B1 145 aa8.03□□□□□ -1.12
CPSF1-204ENST00000529288 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
CPSF1-204ENST00000529288 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
CPSF1-204ENST00000529288 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
CPSF1-204ENST00000529288 PSORS1C2Q9UIG4 136 aa8.02□□□□□ -1.13
CPSF1-204ENST00000529288 RAB5AP20339 215 aa8.01□□□□□ -1.13
CPSF1-204ENST00000529288 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
CPSF1-204ENST00000529288 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
CPSF1-204ENST00000529288 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
CPSF1-204ENST00000529288 NDUFA1O15239 70 aa8□□□□□ -1.13
CPSF1-204ENST00000529288 PPBPP02775 128 aa8□□□□□ -1.13
CPSF1-204ENST00000529288 RNF151Q2KHN1 245 aa8□□□□□ -1.13
CPSF1-204ENST00000529288 FAM104AQ969W3 186 aa8□□□□□ -1.13
CPSF1-204ENST00000529288 CARHSP1Q9Y2V2 147 aaKnown RBP8□□□□□ -1.13
CPSF1-204ENST00000529288 A0A087WZ39 114 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 LOC389332A0A1B0GUA5 103 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 TMEM136Q6ZRR5 245 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 CTDSP1Q9GZU7 261 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 MRPL35Q9NZE8 188 aaKnown RBP7.99□□□□□ -1.13
CPSF1-204ENST00000529288 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
CPSF1-204ENST00000529288 TGIF2-C20orf24A0A0A6YYL0 155 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 IGHV3OR16-9A0A0B4J2B5 98 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 PRSS47A8MTI9 375 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 IFI27P40305 119 aaPredicted RBP7.98□□□□□ -1.13
CPSF1-204ENST00000529288 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
CPSF1-204ENST00000529288 LRP2P98164 4655 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
CPSF1-204ENST00000529288 PRELID3AQ96N28 172 aa7.98□□□□□ -1.13
CPSF1-204ENST00000529288 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
CPSF1-204ENST00000529288 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
CPSF1-204ENST00000529288 F8WDY8 70 aa7.96□□□□□ -1.14
CPSF1-204ENST00000529288 LAMTOR2Q9Y2Q5 125 aa7.95□□□□□ -1.14
CPSF1-204ENST00000529288 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 UBE2BP63146 152 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 RHEBQ15382 184 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 LINC00242Q5T6M2 205 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 TEX43Q6ZNM6 134 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 MAP1LC3AQ9H492 121 aa7.94□□□□□ -1.14
CPSF1-204ENST00000529288 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
CPSF1-204ENST00000529288 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
CPSF1-204ENST00000529288 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
CPSF1-204ENST00000529288 PACRGQ96M98 296 aaPredicted RBP7.93□□□□□ -1.14
CPSF1-204ENST00000529288 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
CPSF1-204ENST00000529288 PYGO1Q9Y3Y4 419 aa7.93□□□□□ -1.14
CPSF1-204ENST00000529288 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
CPSF1-204ENST00000529288 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
CPSF1-204ENST00000529288 Q6ZN92 141 aa7.92□□□□□ -1.14
CPSF1-204ENST00000529288 Q8N8P6 123 aa7.92□□□□□ -1.14
CPSF1-204ENST00000529288 TOMM7Q9P0U1 55 aa7.92□□□□□ -1.14
CPSF1-204ENST00000529288 M0QXV9 152 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 PRSS2P07478 247 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 VCX2Q9H322 139 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 RPS10P5Q9NQ39 176 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
CPSF1-204ENST00000529288 UBE2D1P51668 147 aa7.9□□□□□ -1.14
CPSF1-204ENST00000529288 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 TRBV30A0A0K0K1B3 111 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 H0Y9J4 135 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 APOC3P02656 99 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 S100PP25815 95 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 CKS1BP61024 79 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 LINC00469Q8N7U9 141 aa7.89□□□□□ -1.15
CPSF1-204ENST00000529288 ORMDL2Q53FV1 153 aa7.88□□□□□ -1.15
CPSF1-204ENST00000529288 C6orf226Q5I0X4 101 aa7.88□□□□□ -1.15
CPSF1-204ENST00000529288 C9orf129Q5T035 196 aaKnown RBP7.88□□□□□ -1.15
CPSF1-204ENST00000529288 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms