RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 FAM104BQ5XKR9 115 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 TEX43Q6ZNM6 134 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 DPH3Q96FX2 82 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 PKIGQ9Y2B9 76 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 CSDC2Q9Y534 153 aaKnown RBP6.21□□□□□ -1.42
CHD7-208ENST00000528280 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 IGKV3OR2-268A0A0C4DH90 116 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 SCGB1D1O95968 90 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 PPBPP02775 128 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 CKS2P33552 79 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 CAMPP49913 170 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 SERTAD4-AS1Q5TG53 156 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 ZNF664Q8N3J9 261 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
CHD7-208ENST00000528280 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
CHD7-208ENST00000528280 C14orf144Q96I85 54 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 ALKBH7Q9BT30 221 aaPredicted RBP6.2□□□□□ -1.42
CHD7-208ENST00000528280 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
CHD7-208ENST00000528280 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
CHD7-208ENST00000528280 NUPR1O60356 82 aa6.19□□□□□ -1.42
CHD7-208ENST00000528280 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
CHD7-208ENST00000528280 C20orf202A1L168 122 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 HSBP1O75506 76 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 GAS8-AS1O95177 125 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 PMCHL1Q16048 86 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 MRPL51Q4U2R6 128 aaKnown RBP6.18□□□□□ -1.42
CHD7-208ENST00000528280 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 NRACQ8N912 160 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
CHD7-208ENST00000528280 IGHV1-58A0A0C4DH39 117 aa6.17□□□□□ -1.42
CHD7-208ENST00000528280 FOXI1Q12951 378 aa6.17□□□□□ -1.42
CHD7-208ENST00000528280 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
CHD7-208ENST00000528280 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 XCL1P47992 114 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 CIRBPQ14011 172 aaKnown RBP6.16□□□□□ -1.42
CHD7-208ENST00000528280 KIAA1644Q3SXP7 199 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 C15orf56Q8N910 161 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 VAMP8Q9BV40 100 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 PRO1933Q9H354 126 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
CHD7-208ENST00000528280 ZNF561-AS1K7EIQ3 104 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 SLPIP03973 132 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 MALP21145 153 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 RPL37AP61513 92 aaKnown RBP6.15□□□□□ -1.42
CHD7-208ENST00000528280 ORMDL3Q8N138 153 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 MIEN1Q9BRT3 115 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 LAMTOR2Q9Y2Q5 125 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
CHD7-208ENST00000528280 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
CHD7-208ENST00000528280 D6R8Y8 96 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 COX7A2LO14548 114 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 APOMO95445 188 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 KRTDAPP60985 99 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 SMIM2Q9BVW6 85 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 SPANXA1Q9NS26 97 aa6.14□□□□□ -1.43
CHD7-208ENST00000528280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CHD7-208ENST00000528280 M0R143 59 aa6.13□□□□□ -1.43
CHD7-208ENST00000528280 OXTP01178 125 aa6.13□□□□□ -1.43
CHD7-208ENST00000528280 LINC00614P0C842 121 aa6.13□□□□□ -1.43
CHD7-208ENST00000528280 COX6A2Q02221 97 aa6.13□□□□□ -1.43
CHD7-208ENST00000528280 HSPB8Q9UJY1 196 aa6.13□□□□□ -1.43
CHD7-208ENST00000528280 A0A087WYN8 130 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 PRSS47A8MTI9 375 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 F8WDY8 70 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 G0S2P27469 103 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 MRPS36P82909 103 aaKnown RBP6.12□□□□□ -1.43
CHD7-208ENST00000528280 SYCNQ0VAF6 134 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 C7orf33Q8WU49 177 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 PRELID3AQ96N28 172 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
CHD7-208ENST00000528280 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 K7EMI3 77 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 LEPROTL1O95214 131 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 CARD19Q96LW7 228 aa6.11□□□□□ -1.43
CHD7-208ENST00000528280 IGLV4-69A0A075B6H9 119 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 PANO1I0J062 215 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 NPYP01303 97 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 IFI27P40305 119 aaPredicted RBP6.1□□□□□ -1.43
CHD7-208ENST00000528280 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
CHD7-208ENST00000528280 SPATA45Q537H7 98 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 FA2HQ7L5A8 372 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 FAM19A2Q8N3H0 131 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 PRSS3P2Q8NHM4 247 aa6.1□□□□□ -1.43
CHD7-208ENST00000528280 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms