RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-210	ENST00000528253	RAB5A	P20339	215 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	COMMD7	Q86VX2	200 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	C9orf163	Q8N9P6	203 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	MPLKIP	Q8TAP9	179 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	PRELID3A	Q96N28	172 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	SMIM2	Q9BVW6	85 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	SEC11C	Q9BY50	192 aa		4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	CSDC2	Q9Y534	153 aa	Known RBP	4.66	□□□□□ -1.66
PTP4A2-210	ENST00000528253	NPY	P01303	97 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	XCL1	P47992	114 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	HAMP	P81172	84 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253		Q5VSD8	79 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253		Q6ZSA8	131 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	TIMM21	Q9BVV7	248 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	LAMTOR2	Q9Y2Q5	125 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	UBE2D4	Q9Y2X8	147 aa		4.65	□□□□□ -1.67
PTP4A2-210	ENST00000528253	TRAV9-1	A0A075B6T8	112 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	LOC389332	A0A1B0GUA5	103 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C1orf196	B1AJZ1	125 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	ADCYAP1	P18509	176 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	S100P	P25815	95 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CNBP	P62633	177 aa	Known RBP	4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GAGE2B	Q13066	116 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	KRTAP15-1	Q3LI76	137 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GAGE2E	Q4V326	116 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C10orf25	Q5T742	122 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GAGE2A	Q6NT46	116 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CD164L2	Q6UWJ8	174 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	DPH3	Q96FX2	82 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CHAC1	Q9BUX1	264 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	MAP1LC3A	Q9H492	121 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GAGE2D	Q9UEU5	116 aa		4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	SRRM2	Q9UQ35	2752 aa	Known RBP	4.64	□□□□□ -1.67
PTP4A2-210	ENST00000528253	IGHV3-64	A0A075B6Q5	118 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	IGHV1-58	A0A0C4DH39	117 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	INAFM2	P0DMQ5	153 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	RPL39	P62891	51 aa	Known RBP	4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	HIGD2B	Q4VC39	106 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	SCX	Q7RTU7	201 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C15orf56	Q8N910	161 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	SPANXA1	Q9NS26	97 aa		4.63	□□□□□ -1.67
PTP4A2-210	ENST00000528253	TRAV13-1	A0A0B4J241	112 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253		F8WDY8	70 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	ATP6V1G1	O75348	118 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	G0S2	P27469	103 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	IFI27	P40305	119 aa	Predicted RBP	4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	RNASE13	Q5GAN3	156 aa	Known RBP	4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	SDIM1	Q6ZPB5	146 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253		Q8N8P6	123 aa		4.62	□□□□□ -1.67
PTP4A2-210	ENST00000528253	PCLO	Q9Y6V0	5065 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253		K7EMI3	77 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	COX7A2L	O14548	114 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	APOM	O95445	188 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	MRPS36	P82909	103 aa	Known RBP	4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	COX19	Q49B96	90 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	ORMDL2	Q53FV1	153 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C10orf91	Q5T1B1	145 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253		Q6ZUT4	128 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CIRBP-AS1	Q8TBR5	109 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	RPS10P5	Q9NQ39	176 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	PKIG	Q9Y2B9	76 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	PYGO1	Q9Y3Y4	419 aa		4.61	□□□□□ -1.67
PTP4A2-210	ENST00000528253	IFITM10	A6NMD0	228 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	COX6A2	Q02221	97 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	RHEB	Q15382	184 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	NDUFA5	Q16718	116 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	KIAA1644	Q3SXP7	199 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	OPRPN	Q99935	248 aa	Predicted RBP	4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	GNB1L	Q9BYB4	327 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	NXT2	Q9NPJ8	142 aa	Known RBP	4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CYSLTR1	Q9Y271	337 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	PAM16	Q9Y3D7	125 aa		4.6	□□□□□ -1.67
PTP4A2-210	ENST00000528253	APOC3	P02656	99 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	SYCN	Q0VAF6	134 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C2orf66	Q6UXQ4	117 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253		Q6ZN92	141 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	TEX43	Q6ZNM6	134 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C5orf38	Q86SI9	138 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	LINC00526	Q96FQ7	95 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	TMEM141	Q96I45	108 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	CARD19	Q96LW7	228 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	C2orf88	Q9BSF0	95 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	VCX2	Q9H322	139 aa		4.59	□□□□□ -1.67
PTP4A2-210	ENST00000528253	IGLV4-3	A0A075B6K6	122 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	SNAPIN	O95295	136 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	MT-ND6	P03923	174 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	FABP9	Q0Z7S8	132 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	CIRBP	Q14011	172 aa	Known RBP	4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	PAPPA-AS1	Q5QFB9	102 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	SVBP	Q8N300	66 aa		4.58	□□□□□ -1.68
PTP4A2-210	ENST00000528253	FAT1	Q14517	4588 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253	IGLV4-69	A0A075B6H9	119 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253		A0A087WYN8	130 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253	IGKV2-24	A0A0C4DH68	120 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253	IGLV5-39	A0A0G2JS06	123 aa		4.57	□□□□□ -1.68
PTP4A2-210	ENST00000528253	LINC01549	A6NIU2	74 aa		4.57	□□□□□ -1.68

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